Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4138 ATGAGTTGGAAAAGTAGAGGAGAGATTGTTCCTAGAAATTTTATGTCTCAGAAATGGATGATTTTCTTGTGTATTGCAAGTTTCTGTGCTGGAATGTTCTTCACCAACAGGATGTGGACTATTCCTGAACCTAAAGGACTTGCAAGGACAACAGCAATGGAAGCTGAACAATTAAATGTAGTTTCAGAGGGTTGTAATACAAGAATTTTGCAAGAGAAGGAAGTGAAGCGCGTAATTAAAGGCGATTTCAAGACACATAAAACCTTAGAAAATTTGGATAAGACTATTTCAAATTTGGAAATGGAATTAGCTTCTGCTAAAGCAACTCAAGAATCTCTAAGAAATGGTGCACCTGTATCAGAAGATATTAAGATAAATGCATCAACTGGTAGGAGAAAGTACTTAATGGTTATAGGAATTAACACTGCTTTTAGTAGCAGAAAAAGAAGAGACTCGGTTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATCCGTTTTGTAATTGGACACGGTGCCACGACTGGAGGTATCCTAGATAGAGCTATCGAAGCAGAAGATAGTAAACATGGAGATTTCCTGAGACTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAAACAAAGACCTACTTTGCCACTGCTGTTAACTTGTGGGATGCTGACTTTTATATCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTTGGAGAAACACTAATTAGACATCGTTCGAAACCGCGAGTATACATCGGATGCATGAAATCTGGACCGGTTCTTGCTCAAAAAGGAGTAAGGTACCATGAACCAGAATATTGGAAATTCGGCGAGACAGGAAACAAGTACTTTCGTCATGCGACAGGACAATTGTATGCTGTTTCAAATGATCTTGCTACATATATTTCAACAAACAAGAATGTTCTTCACAAATATGCAAATGAAGATGTTTCATTAGGAGCTTGGTTTATTGGACTTGATGTGGAGCATATAGACGATCGTAGACTATGTTGTGGTACAACAGATTGTGAATGGAAGGCCCAAGCAGGAAATGCTTGTGTTGCTTCATTTGATTGGACATGCAGTGGAATTTGTAGGTCAGCTGAAAGGATTAAAGAAGTTCACAAAAAATGTGGAGAAGGTGAGAAAGCCTTATGGAGTGCTTCTTTCTAG 1209 0.3854 MSWKSRGEIVPRNFMSQKWMIFLCIASFCAGMFFTNRMWTIPEPKGLARTTAMEAEQLNVVSEGCNTRILQEKEVKRVIKGDFKTHKTLENLDKTISNLEMELASAKATQESLRNGAPVSEDIKINASTGRRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHGATTGGILDRAIEAEDSKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGETLIRHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGETGNKYFRHATGQLYAVSNDLATYISTNKNVLHKYANEDVSLGAWFIGLDVEHIDDRRLCCGTTDCEWKAQAGNACVASFDWTCSGICRSAERIKEVHKKCGEGEKALWSASF* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4138 402 Pfam Galactosyltransferase 148 345 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr7g4138 402 Gene3D - 132 348 - -
Tpr7g4138 402 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 394 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr7g4138 402 Coils Coil 89 116 - -
Tpr7g4138 402 Pfam Domain of unknown function (DUF4094) 16 108 IPR025298 -
Tpr7g4138 402 PANTHER HEXOSYLTRANSFERASE 7 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4138 Tpr-Chr7 50480208 50484578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4138 1 402 Glycosyltransferase AT1G05170 76.658 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4138 K20855 - gmx:100793931 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4138 7 50480208 50484578 Tpr7g4138 7 50480208 50484578 ECH
Tpr7g4138 7 50480208 50484578 Tpr7g4138 7 50480208 50484578 PCT