Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4137 ATGGCTAAGAGTTCGTTCAAGATGGAACACCCCCTTGAGAGGAGGCAGGCTGAAGCAGCTCGCATAAGGGAGAAGTATCCCGATAGAATTCCAGTAATTGTTGAAAGGGCTGAGAAGAGTGATGTTCCAGATATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTAACTGTAGGCCAGTTTGTGTATGTGGTGCGTAAGAGAATCAAATTGAGTCCTGAGAAGGCTATCTTCATTTTTGTGAAGAACATTTTGCCGCCAACAGCTGCTATGATGTCTGCAATATATGAGGAAAACAAGGATGAAGATGGATTCCTCTATATGACTTACAGTGGGGAGAACACTTTTGGGATTTTAATATGA 363 0.4187 MAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGILI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4137 120 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Tpr7g4137 120 CDD Ubl_ATG8 12 114 - -
Tpr7g4137 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Tpr7g4137 120 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Tpr7g4137 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Tpr7g4137 120 Gene3D - 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4137 Tpr-Chr7 50456121 50464325 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4137 K08341 - pop:7468504 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4137 7 50456121 50464325 Tpr7g4137 7 50456121 50464325 ECH
Tpr7g4137 7 50456121 50464325 Tpr7g2663 7 33840295 33842690 ECH