Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4125 ATGACCAATCAAAATCCTCTCCCTCTCTATGACAAAATTTTGGTAAAGTATACATTTTCAAGAGTGGTGGATTCAATCACTTTGCTCTTCCTTATCTTGCTTCTTGGTTACCGTATTTCCTATAGCAACATTTATACATTCCCCTGTTTTGTTGCTCTGTTTTGTGAGTCATGGTTTACCTTCACTTGGATTCTCACCATGAACCTCAAATGGAATCCAGCATATACCATAACCCACCTAGACCGTCTCTTGCTCAGGGAAGACGAGCTTCCACCATTGGATTTGTTTGTGACAACAGCAGATCCTGTTCTTGAACCACCAATCATCACTGTGAACACAGTGTTGTCTCTGTTGGCACTTGATTATCCAGTTAATAAATTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTCACATATTATGCCATTGTTGAAGCCTCTAAATTTGCCAAGGTTTGGGTACCTTTTTGTAAGAAATACAATGTGCAAATTAGAGCACCTTTTAGGTATTTCTCTGATGAGAATCTTGTTAGCAACAGAGAAGAGTCACCAGAATTTTATCAAGATTGGTTAAGAATGAAGGAGGAATATGGGAACCTCAAGAATAAAATTGAGAATACAGAACAAAATTCACTTCCTCTTATAGGAGAGTTTGCTATTTTTTCAAATGCAAAACAGAGAAATCATTCAACCATAATCAAGGTGATATGGGAGAACAAGAGCAAGGAAAATCATCTAGATGGCTTGCCTCACTTAATCTACATATCTAGAGAGAAGAAGCCTCAACATCCACATCATTACAAGGCTGGTGCTATGAATGTGCTTACAAGAGTCTCTGGTTTGATGACAAATGCTCCTTTCATCTTGAACTTAGATTGTGACATGCATGTCAACAATCCAAAAATTGCTCTACATGCCTTATGCGTTTTGTTAGATTCAAAAGGAGAAAAGGAAGTAGCATTTGCACAATGTCCCCAACAATTCTATGATGGATTAAAAGATGATCCTTTCGGAAATCAGCTTACTACATTGTTTCTGTACATAGGGGGCGGATTTGGAGGACTTCAAGGAATGATATACGCAGGAACAAATTGCTTCCATAGAAGAAAAGTAATTTATGGCCTTTATGCTGCTGATCAAGACATTCAAAATGGAAAGAAGGGTTGGAATGAGAGTGTTTTAGAAATGAAAATGGTATTTGGAACTTCAAAGAGGTTTGTGGAATCAGCTAGTCAAGCATTGGAAGGAAAAATATTTGCTCCTAAAGATAACCTTTGTAACTATCTTGAGGCAGCAAAAAAAGTTTCTAGTTGTGGATATGAAGACAACACTGCCTGGGGTAAAAAGGCAGGTTGGATATATGGATCAACATCAGAGGATATACTTACTGGGTTGGACATCCATACAAGAGGATGGAGATCTGAAATATGCTCACCAGATCCAATTGCCTTTAGGGGATGCTCACCTCAAGATAACATAGTATCTTTGATTCAACAGAAAAGGTGGGCCTCAGGGTTAACTGATATTCTACTCAGCAAGCATAATCCAATATTGGGCTTTCTCTGTGGTAAGCTCCAATTTAGAGAGGCTTTGGGCTATGTTTGGCTCTTATGTTGGGGCTTAAGATCAGTACCTGAAATTTGCTATGCTGCTCTACCTGCCTATTGCATTCTTACTAACTCCAGCTTCTTGCCTGAGAAACTTTGGATACATGGTGCTTTGTTTGTGACTTACAACATATCTACTCTATCTGAGTCCTTAAGAACAGGGTTGTCAATTAAAACATGGTGGAACACTCAAAAAATGATGAGAATTACAACCATGAGTGGTTGGTTTTTTGGATTTTTGGCCATCTTACTAAAAAAATTAAGGATATCTGAACCTATCTTTGAAATAACAAAGAAAGAACAATCATCAACTTCTTTTGATGGAGCTAACCAAAATAGTGGTAGGTTTAGTTTCAATGAGTCTCCAATTTTTCTACCTAGTACAACAATATTGTTTGTTCAACTCATAGCATTGGGTACTTGCTTATTTGGATGGGCCCAACATGTTAGAAGTGGGCTTGGATATGGGCTTGGAGAAGTGTTATGTAGTGCTTATTTGGTTGCATGTTATTGGCCATTTTTGAAAGGGTTGTTTGGGACTGGAAAGCATGGGATTCCCTTATCTACAATAATCAAGTCAACAATGTTGACTTTTCTTTTTGTGCATTTTTGCAAACTTACCATTATAGTGTGA 2244 0.3792 MTNQNPLPLYDKILVKYTFSRVVDSITLLFLILLLGYRISYSNIYTFPCFVALFCESWFTFTWILTMNLKWNPAYTITHLDRLLLREDELPPLDLFVTTADPVLEPPIITVNTVLSLLALDYPVNKLACYVSDDGCSPLTYYAIVEASKFAKVWVPFCKKYNVQIRAPFRYFSDENLVSNREESPEFYQDWLRMKEEYGNLKNKIENTEQNSLPLIGEFAIFSNAKQRNHSTIIKVIWENKSKENHLDGLPHLIYISREKKPQHPHHYKAGAMNVLTRVSGLMTNAPFILNLDCDMHVNNPKIALHALCVLLDSKGEKEVAFAQCPQQFYDGLKDDPFGNQLTTLFLYIGGGFGGLQGMIYAGTNCFHRRKVIYGLYAADQDIQNGKKGWNESVLEMKMVFGTSKRFVESASQALEGKIFAPKDNLCNYLEAAKKVSSCGYEDNTAWGKKAGWIYGSTSEDILTGLDIHTRGWRSEICSPDPIAFRGCSPQDNIVSLIQQKRWASGLTDILLSKHNPILGFLCGKLQFREALGYVWLLCWGLRSVPEICYAALPAYCILTNSSFLPEKLWIHGALFVTYNISTLSESLRTGLSIKTWWNTQKMMRITTMSGWFFGFLAILLKKLRISEPIFEITKKEQSSTSFDGANQNSGRFSFNESPIFLPSTTILFVQLIALGTCLFGWAQHVRSGLGYGLGEVLCSAYLVACYWPFLKGLFGTGKHGIPLSTIIKSTMLTFLFVHFCKLTIIV* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4125 747 Pfam Cellulose synthase 387 737 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr7g4125 747 Pfam Cellulose synthase 93 384 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr7g4125 747 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 745 - -
Tpr7g4125 747 Coils Coil 191 211 - -
Tpr7g4125 747 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 5 745 - -
Tpr7g4125 747 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 534 IPR029044 -
Tpr7g4125 747 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 395 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4125 Tpr-Chr7 50314489 50323622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4125 3 738 Glycosyltransferase AT2G32540 47.375 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4125 - - gmx:100780817 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4125 7 50314489 50323622 Tpr7g4125 7 50314489 50323622 ECH
Tpr7g4126 7 50325494 50331142 Tpr7g4125 7 50314489 50323622 PCT