Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4122 ATGGCGGAATTCCTAAGCCCTAATCCAACAACTGTTCACAAAAAGAAGCTTCCCATCTCCACAACAAATTTCTTCGTCGGCTCCAACGACGACCAACTCGAACGCGCCGCTGCTCGTGCTGCTCGTGTTGCCGCTATCCGCCGTACTTCCTGTGCCGTTAACTTCAAACCTCAACCCGCCGATTCGGATCCTGTTCTCAACAAGCAGCAGATTCTCGAGTTATTCCGAAATTGCATTAAGCTTGCTTCAGAAAATAAAATTAATCAGAAAAATACATGGGATTTGGATTTGATTGATCATCTTACTGATATTATTAGGGCTGACGATGATAGTAATGACGCGGAAACTAATTTTCAAATGGCAAGCTGCACCCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCGGTGTATTCCGAGGCATATAAAGTTCTTGCTAGAATGAATAGGGCAGGCTATGAAACGGAGCAAGACACTACTCTAGAGAGTGCTAATGCTGAAGGTGGGCAAGAAGATAGCAAGAAGGGAATCGTAAAAAAATTGTCACCTTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGTTGCATTTGCTGTGGATCCCCTCTATCGCCAAACATCAGCAAAATTTGATGAAGGGGGAGCTAAAGGTCTTTTGATGAATAACCTCGGTGTATATGGTAGATGTAGGGTGCTCTTTGATTCACTAGATGTGCCAGGGACGTATGTAGCTAGTCAAAATGAACATGATATTTCAGATGTAATTGATCTTTCTTTTGCACAAGATTGTGTTGAACAGATGGTAATGGACATGGATATTAAGGATGCAATTTCTCCAACTCTCAGGGTGATAGTAAATCAATTTGATGAAAATAATAGAAGGCCCTCCGATTTTCAATTTCATGGCCAAAATTCAGCAGAAGAGTTTGATGCAGCTATTGATTGTGAAGGTGGGGCTGAATCAGAAGAAGACCACGAGAACTTCCCAAGTTGGCCTTATGAACATGACAACCAAACATTTGTTGCTGAACTGGGCTCTAATGATGTAGACCCAAATTTTTCAAGTTATCCTCAGGAGAAAGAACCTTTTCCTTCCCAAGACCCTGAAATGGATGAAATATTTGGAAATGTTGATGAGTGTCTATTTGCTAGTCTGGGTTTTAGGTCAAAGAAAAATGCGTGGGCAGGTCCAGATCATTGGCAGTACCGAAAAACTAAAGGTTCAGAGTCAGAAGTTCATTGTTCTTCTGAAGATGGGTCAACCCTCAAAACTAGGCGGTCAAGGACTATGAGACAGATCGAAGTTGATTTAAATTTCACAAATTTTCTTGGAAAAACACTTCCAGATATCTTTGCTCCTCCCAAGAATCATAAATCGTTATTACTCCCTAAAAATAGACCCGTTTGTGTTACAAAACTCCCAGAGGACTGCCACTATGAGCCAGAGGATCTTGTCAAGTTATTTCTTTTGCCTAATGTTAAGTGTATTGGGAGGAGGACGAGAAAGTTCTCAGGTAATATGTGCTATTGTGATCGCAACATTTCATTCTTTATATCCTCCAATTCAATGTCTATCAATATAAATAACATTTTAGTGTGTTTTCATGTATTACTATATTGCACTTATACCACAGATGCAGATGGATCGACTGAGCAATGCAATAACAATGAACCATTCAATTCATGGGATAATGGAAGTGTTTGTGATGGTGAGTATGATGGTGCACATAGTGATATGGATGACTCAAGCACACTTATTTCTCCGCCTCGTCAGATCAACAAAATTGAAGTTCAATATGACAAAACGTCCAAACAAGTTGATGTTCAGGCACTGAAATTTACTCTTTGGAACTGTATTCAAGAAATTCAAGAATCCGTTCAACTTCCTTTACAGGGTGAGAAAGAAATGGCGTCTTTCAGGCATATATTGGCCAACTTTCCTAGTGAATGCAATGCTGCTGCAACTGTTACTGACATATCTCCACATTTGTGTTTCATATGCCTCTTGCATTTGGCTAATGAGAAAGAGTTGAGCATCCAAAGCTGCCCAAACTTGGATGATCTTCACATATATATGCCTAACTGA 2109 0.3988 MAEFLSPNPTTVHKKKLPISTTNFFVGSNDDQLERAAARAARVAAIRRTSCAVNFKPQPADSDPVLNKQQILELFRNCIKLASENKINQKNTWDLDLIDHLTDIIRADDDSNDAETNFQMASCTLEAGVKIYSLRVDSVYSEAYKVLARMNRAGYETEQDTTLESANAEGGQEDSKKGIVKKLSPLSTLESSFEVLNVKKFDVAFAVDPLYRQTSAKFDEGGAKGLLMNNLGVYGRCRVLFDSLDVPGTYVASQNEHDISDVIDLSFAQDCVEQMVMDMDIKDAISPTLRVIVNQFDENNRRPSDFQFHGQNSAEEFDAAIDCEGGAESEEDHENFPSWPYEHDNQTFVAELGSNDVDPNFSSYPQEKEPFPSQDPEMDEIFGNVDECLFASLGFRSKKNAWAGPDHWQYRKTKGSESEVHCSSEDGSTLKTRRSRTMRQIEVDLNFTNFLGKTLPDIFAPPKNHKSLLLPKNRPVCVTKLPEDCHYEPEDLVKLFLLPNVKCIGRRTRKFSGNMCYCDRNISFFISSNSMSININNILVCFHVLLYCTYTTDADGSTEQCNNNEPFNSWDNGSVCDGEYDGAHSDMDDSSTLISPPRQINKIEVQYDKTSKQVDVQALKFTLWNCIQEIQESVQLPLQGEKEMASFRHILANFPSECNAAATVTDISPHLCFICLLHLANEKELSIQSCPNLDDLHIYMPN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4122 702 PANTHER CONDENSIN COMPLEX SUBUNIT 2 553 702 IPR022816 GO:0000796|GO:0007076
Tpr7g4122 702 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 515 IPR022816 GO:0000796|GO:0007076
Tpr7g4122 702 PIRSF Condensin_H 268 701 IPR022816 GO:0000796|GO:0007076
Tpr7g4122 702 PIRSF Condensin_H 5 271 IPR022816 GO:0000796|GO:0007076
Tpr7g4122 702 Pfam Condensin complex subunit 2 26 698 IPR022816 GO:0000796|GO:0007076
Tpr7g4122 702 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 515 - -
Tpr7g4122 702 PANTHER CONDENSIN COMPLEX SUBUNIT 2 553 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4122 Tpr-Chr7 50281665 50286319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4122 K06676 - gmx:100777082 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4122 7 50281665 50286319 Tpr7g4122 7 50281665 50286319 ECH
Tpr7g4122 7 50281665 50286319 Tpr7g4122 7 50281665 50286319 PCT