Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4117 ATGGATTGCAGCATCTCCACCGTTCTTCTCCTCTCCTTTCTCACAATTCTCTCTTCTTCTTCTTCTTCTTCTTTACCAACGAGTCAAATCAACTCCAACTCAGTCCTAGTAGCACTTCTTGACTCACATTACACTGAACTCGCTGAACTCATTGAAAAAGCCATGCTATTACAAACACTAGAAAACACCGTCGCAAACCACAACATCACAATCTTCGCACCAAACAATGAAGCTCTTGAACGTAATCTTGACTCCGATTTCAAACAATTTCTTCTCGAACCGGGTAATATCCATTCCCTTCAAACTCTCCTCTTGTTCCACGTCATTCCAACCCGAATCGAATCCGGGTCAACCCGACATCAACACCAACACAAAACTCTCTCCGACCACCACCTTCATCTCGAAACAAATATCACCACCGGAGAATGGACTGTTAATCAAGCCAAAGTAACCCACCCGAATATTCTGACCCGACCCGACGGTGTCATTCACGGGATCCAGCGTCTTCTTATACCACGCTCAGTTGAAGACGATTTCAACAAACGCCGTAGTCTCCGTTCAATCACCGCCGTGAAACCGGAGGGAGCACCGGATGTCGATATTAGAAACCACCGATTAAAAAAATCTCCTCCGCCGGAAAAACCAGGTTCACCGCCGGAACTTCCGATCTACGACGCTATATCACCGGGACCATCGTTAGCTCCGGCGCCGGCACCGGGACCAGGCGGGCCACACCACCACTTCAACGGCGAGGCACAAGTAAAGGATTTCATCAAAACATTACTTCATTACGGTGGTTACAACGAAATGGCTGATATTCTCGTTAACCTGACGTCGTTAGCAACTGAAATGAGCCGTTTAGTTTCAGAAGGTTATGTGTTAACGGTTTTGGCTCCAAATGATGAAGCAATGGCGAAGTTAACGACGGAGCAGTTAAGTGAACCGGGTTCACCTGAAGAGATAATGTATTACCACATTATCCCTGAGTATCAAACTGAAGAGAGTATGTATAATGCTGTTAGAAGATTTGGGAAGGTTCGGTATGATACATTGCGGTTGCCGCATAAGGTGGTGGCTGAGGAGGCTGATGGGTCTGTTAAATTTGGAAATGGTGATGTTTCGGGTTATTTGTTTGACCCGGATATTTATACCGATGGGAGGATCTCTGTGCAGGGGATTGATGGGGTTTTGTTTCCGATGGAGGAGGAGAAGGAGGAGGTTGTCGAGCAGGTTAAACCCGTTTCAAAGATGGGTCAAACCGCTAAAGTTGTTGTCAAGCATAGGAGAGGGAAACTGCTGGAAACAGCATGCTGGATGCTTGGAACATTTAGAAACCATTCTAGATTCGCCTCTTGTCAATGA 1362 0.4633 MDCSISTVLLLSFLTILSSSSSSSLPTSQINSNSVLVALLDSHYTELAELIEKAMLLQTLENTVANHNITIFAPNNEALERNLDSDFKQFLLEPGNIHSLQTLLLFHVIPTRIESGSTRHQHQHKTLSDHHLHLETNITTGEWTVNQAKVTHPNILTRPDGVIHGIQRLLIPRSVEDDFNKRRSLRSITAVKPEGAPDVDIRNHRLKKSPPPEKPGSPPELPIYDAISPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAEEADGSVKFGNGDVSGYLFDPDIYTDGRISVQGIDGVLFPMEEEKEEVVEQVKPVSKMGQTAKVVVKHRRGKLLETACWMLGTFRNHSRFASCQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4117 453 SUPERFAMILY FAS1 domain 34 173 IPR036378 -
Tpr7g4117 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 7 453 - -
Tpr7g4117 453 Pfam Fasciclin domain 43 172 IPR000782 -
Tpr7g4117 453 Pfam Fasciclin domain 277 368 IPR000782 -
Tpr7g4117 453 SMART fasc_3 70 173 IPR000782 -
Tpr7g4117 453 SMART fasc_3 295 400 IPR000782 -
Tpr7g4117 453 Gene3D FAS1 domain 35 173 IPR036378 -
Tpr7g4117 453 SUPERFAMILY FAS1 domain 233 400 IPR036378 -
Tpr7g4117 453 MobiDBLite consensus disorder prediction 188 219 - -
Tpr7g4117 453 Gene3D FAS1 domain 248 399 IPR036378 -
Tpr7g4117 453 ProSiteProfiles FAS1/BIgH3 domain profile. 31 170 IPR000782 -
Tpr7g4117 453 MobiDBLite consensus disorder prediction 197 211 - -
Tpr7g4117 453 ProSiteProfiles FAS1/BIgH3 domain profile. 254 397 IPR000782 -
Tpr7g4117 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 7 453 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4117 Tpr-Chr7 50245308 50248596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4117 - - gmx:100782264 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4117 7 50245308 50248596 Tpr7g4117 7 50245308 50248596 PCT