Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4116 ATGACATACATGGCTCCGGCTCGAGGACTCGCCATTGTGATCCTGTTATTAGCTCTGTACTGTGGATTAGACCCCTTCAAGCACAGCCCTATCCGAGGCTTACCTGATTTTGAGGTGCACAAAGTTAACTTGCCATCATGGTCTGAGGTTCCTACAGACTGTGACAAAGACAACTTGTTGCAGAAATCGGAGATCCTGTTTGAGAACCAAGTACAGGGCCCAGAGAGCATTGTCTTCGATCATCATGGTCGTGGTCCTTACACTGGTGTTGCTGATGGAAGAATTTTATTTTGGAATGGACTGTCTTGGATTGATTTCGCCTACACCTCACCCAACAGGTCAGAAATATGCAATCCAAAGGAATCTGCAACACCATTTAGTTATGTTGAGACTGAGCACATCTGTGGAAGGCCTTTGGGACTAAGATTTGACAAGAAAACAGGTGATTTATACATTGCAGATGCATATTTTGGGCTGATGAAGGTAGGGCCTCAAGGTGGTTTAGCAACATCTCTTGCAACTGAGGTAGAAGGAGCGCCGATCAGATTTACTAATGATGTCGACTTTGATACAGAAGGGAACGTTTACTTCACTGATAGCAGTACTAAATATCAGAGAAGGAACTTCATTCATCTTACATTTTCTGGTGAAAATACTGGAAGGGTTTTGAAATACAGTCCTGCCACCAAGGAAACCACTGTTCTTGTAAGGAACATTCATTTTCCAAATGGGATTACCTTAAGCAAGGATGGTTCCTTCTTTCTATTTGCAGAAGGGCTAATTGGAAGGCTACACAAGTATTGGTTAAAAGGAGATAAAGCTGGAACTTCAGAAATCTTTGCAATCCTACCTGGTTTTCCTGATAATGTGAGAGTCAATGAAAATGGTGACTTTTGGGTGGCTATCAATTGTAGAAGGTTTATGTACAGTTACCTGAATGCTCTCTACCCAAAAATGAGAAAAATCATCCTCATGCTACCTATTCCAACAAGGATAAACTACATGCTTCAAATTGGAGGCAAGTTTCATGCAGCTATTGTTAAGTATAGCCCTGAAGGTAAACTTCTGCAGATATTGGAGGACAGTGAGGGAAAAGTTGTTAAAGCAGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTTTGGATAGGAAGTGTTATGATGCCTTTCATTGCAGTTTACCATTTGACATGA 1191 0.4165 MTYMAPARGLAIVILLLALYCGLDPFKHSPIRGLPDFEVHKVNLPSWSEVPTDCDKDNLLQKSEILFENQVQGPESIVFDHHGRGPYTGVADGRILFWNGLSWIDFAYTSPNRSEICNPKESATPFSYVETEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPQGGLATSLATEVEGAPIRFTNDVDFDTEGNVYFTDSSTKYQRRNFIHLTFSGENTGRVLKYSPATKETTVLVRNIHFPNGITLSKDGSFFLFAEGLIGRLHKYWLKGDKAGTSEIFAILPGFPDNVRVNENGDFWVAINCRRFMYSYLNALYPKMRKIILMLPIPTRINYMLQIGGKFHAAIVKYSPEGKLLQILEDSEGKVVKAVSEVEEKDGKLWIGSVMMPFIAVYHLT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4116 396 Pfam Strictosidine synthase-like, N-terminal 59 97 - -
Tpr7g4116 396 Gene3D - 58 396 IPR011042 -
Tpr7g4116 396 SUPERFAMILY Calcium-dependent phosphotriesterase 52 393 - -
Tpr7g4116 396 Pfam Strictosidine synthase 185 271 IPR018119 GO:0009058|GO:0016844
Tpr7g4116 396 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 395 - -
Tpr7g4116 396 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 11 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4116 Tpr-Chr7 50242221 50244897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4116 - - mtr:MTR_2g087780 693.345