Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4102 ATGGTGATCACAAAGTGTTGGCAATGTTTAATGAACTTCCCAAGTGAATTTATTGCTAATGTAAACAATGTAATGTTGCAATTGAACAAACTAGGAAAAGATGATCCTAGAAGGGTTATTCATTCTTTGAAAGTATCACTTGCCATTACATTGGTTTCAACATTTTACTATTTTAAACCACTTTATGATAGTTTTGGTTCTTCTGCAATGTGGGCTGTTATCACTGTCATTGTTGTCTCTGAATTCTCTGTAGGAGCAACGCTTGGAAAAGGTTTAAACAGAGGTTTTGCAACATTTTTGGCTGGTGTTCTTGGACTTGGATCATATTATATAGTTCATTTAATTTCAAGTGGAAATACAATAATGGAATCCATACTTCTTGGAATCATAATATTTCTAGCAACTGCAGGGGTGACATATATTAGATTTTTACCTAAAATGAAAGCTAGATATGATTATGGTTTGCTAGTGTTTATCTTGACATATTGTTTGGTATGTGTATCAAGCTTTAGAGAGCATGAGATAATTGACACTGCACAAGATAGGGTAACAACAATTCTAGTTGGTGGATTAATTTCTGTGTTGGTTAACATTTTATTGTGCCCTGTTTGGGCTGGTTGTGATCTTCAAAATCTAGTATCAAATAACATTGAAAAACTAAGCAACTTTTTAGAAGGTTTTGGAGATGAATATTTTGGAACATTAGAGGCTGGAAAATTAAATAAATCACTTATGCAAGGATATAAGAGTGTTCTTAATTCAAAACAAGTTGAAGATAACTTGACGAATTTTGCGAGGTGGGAGCCTTGCCATGGACGTTTTGGATATCATCATCCATGGCAACAATATCAAAAGATTGGAAACCTATCAAGGCAATGTGCATATCGGATTGATGCCCTTAACGGCTTCCTTAACAACTTTACTAAGACACCAAAGGAAATCAGAAGCAAAATACAAGAACCATGCATTCAAATGAGCATAGAAACAGGAAAGGCTTTAAAGCAATTAGCAATATCAATCCACAAAATGATTCCACCAATTGCAGCAAAAACTCACATTACAACATCTAAGATTTATGCCACAAACCTTAAATCCATGATTAAAACAAAATTATGGGAAGACACAAATTTGTTTGAGGTTGGTCCTGTTGTAACGGTAGCTTCATTATTGCTTGATGTGGTTTGTTCCATTGAAAAACTTGTAGAGTCCGTACAAGAATTATCCACCTTAGCAAAATTTAAGAACAAAGAAAATAACATTGCTGTCGAGGATCAAAAAGAAGTTCCACAACCATGTTGTAATAGTAGTGGACCTCAACATGTTATTACGATAGTTCCAGAAGATATAGTTCAGTGA 1356 0.3422 MVITKCWQCLMNFPSEFIANVNNVMLQLNKLGKDDPRRVIHSLKVSLAITLVSTFYYFKPLYDSFGSSAMWAVITVIVVSEFSVGATLGKGLNRGFATFLAGVLGLGSYYIVHLISSGNTIMESILLGIIIFLATAGVTYIRFLPKMKARYDYGLLVFILTYCLVCVSSFREHEIIDTAQDRVTTILVGGLISVLVNILLCPVWAGCDLQNLVSNNIEKLSNFLEGFGDEYFGTLEAGKLNKSLMQGYKSVLNSKQVEDNLTNFARWEPCHGRFGYHHPWQQYQKIGNLSRQCAYRIDALNGFLNNFTKTPKEIRSKIQEPCIQMSIETGKALKQLAISIHKMIPPIAAKTHITTSKIYATNLKSMIKTKLWEDTNLFEVGPVVTVASLLLDVVCSIEKLVESVQELSTLAKFKNKENNIAVEDQKEVPQPCCNSSGPQHVITIVPEDIVQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4102 451 Pfam Aluminium activated malate transporter 30 408 IPR020966 GO:0015743
Tpr7g4102 451 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 421 - -
Tpr7g4102 451 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 10 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4102 Tpr-Chr7 50051767 50054133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4102 18 448 Miscellaneous Gene Families AT2G27240 45.598 2.49e-139 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4102 - - gmx:100787221 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4102 7 50051767 50054133 Tpr7g4102 7 50051767 50054133 ECH
Tpr7g4102 7 50051767 50054133 Tpr7g4102 7 50051767 50054133 PCT