Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3870 ATGGATTCATCAAATTCAACAAACTCACCAATCACCACAATCCACCCAGACATAATCCAATCACACATCCTCACGCGTCTCGACGGCACAACTCTCACCTCCGCCGCCTCCACCACCTCCCACCTCCACAATCTCTGCACTCAAAACCACCTCTGGCAAAAAATCACCACCACCACGTGGCCTTCTCTCAACGATACTCTAACCAAATCTCTCATCTCCACTTTCCCAAACTCTCACCGTTCCATTTTCTCCGACTCTTTCCCCTCCATCCATTACTCCTCCGCTTCAACACCACCGGATGATTCTTCATCGCCATCACCGTTGAAAGAATTGATCTCCGCCGTTGATTTATACTATAAGGGTAAACCCGTCTTTTCAAAAGTTCTCAAAACAGAAACACATAAGGGATGGTTTTTATGTTCACCTTTATGGATTGAAATTCTCGAACCAAACGAGATTATTCAAACGCAAATAAAATTCGACCAAAACGACGTCGTTGAATGGCTTGAAAATAATTTAAGTTTAAGCTGGATTATTATTTCACCGACACGTAAGCGTTCGGTGAATTTGTCTAGCCGGTTACCGGTAACAGTTACACGTCATTGGTTAACGGATGAGTTAGAGGTTTTATACGCTGTGGTTATGGGATTAGTGCAGTGCACGGTAAAGGTCACGTGTTGTGGTAAATCTGGGGGTGAAATGCACGTGAGGGAAGTGAGTTTAAGTATGGAGGATATGTACGGAAGACATTTGATTGGGAGGGATAGTTTGGGGATTTTACAAGAAGTGATGGAAAATGGTGAGAGGAAGAAAGTGGATGTTGAGAAAATGAAGAGTGGATTTGAGGAATTTTGTTTGATGAAGAGAGAGAAAATAGAGAGAAAGTTGAAGAGAGAGAAAGTAATTGATATGGTTATTATGGTAATTGCAATTTTTATTTTTGCATTTATGTTTAGGTTTGTGAGGTTATGGGTTTCATCCAAATGA 987 0.4154 MDSSNSTNSPITTIHPDIIQSHILTRLDGTTLTSAASTTSHLHNLCTQNHLWQKITTTTWPSLNDTLTKSLISTFPNSHRSIFSDSFPSIHYSSASTPPDDSSSPSPLKELISAVDLYYKGKPVFSKVLKTETHKGWFLCSPLWIEILEPNEIIQTQIKFDQNDVVEWLENNLSLSWIIISPTRKRSVNLSSRLPVTVTRHWLTDELEVLYAVVMGLVQCTVKVTCCGKSGGEMHVREVSLSMEDMYGRHLIGRDSLGILQEVMENGERKKVDVEKMKSGFEEFCLMKREKIERKLKREKVIDMVIMVIAIFIFAFMFRFVRLWVSSK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3870 328 PANTHER F-BOX PLANT-LIKE PROTEIN 6 319 - -
Tpr7g3870 328 PANTHER F-BOX PROTEIN-RELATED 6 319 IPR045283 -
Tpr7g3870 328 SUPERFAMILY F-box domain 16 80 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3870 Tpr-Chr7 47900126 47901456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3870 - - gmx:100794825 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3870 7 47900126 47901456 Tpr7g3870 7 47900126 47901456 ECH
Tpr7g3870 7 47900126 47901456 Tpr4g1495 4 14737969 14739228 PCT