Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3817 ATGGTAGTCATGGAGGAATTCAAGCACTTTGTGATTGTTAAGTTCAAAGAAGATGTAGTAGTGGAAGAGCTCACAAAAGGGATGGAAAAATTGGTCTCAGAGATTGATCTTGTCAAATCCTTTGAATGGGGACAGGATGTTGAAAGCCTAGATGTATTGAGACAAGGATTCACTCATGCTTTCTTGATGACATTCAACAAGAAAGAAGACTATGCTGCATTTCAGAGCCATCCAAATCATGTTGAATTTTCTGAAAAATTTTCAACAGCTATTGAAAAGATTGTGCTTCTGGATTTTCCTTCCACCCTTGTCAAGCCAGTCAAGGAAGCAGAAGCAGAAGCAGCAGCATAA 351 0.3903 MVVMEEFKHFVIVKFKEDVVVEELTKGMEKLVSEIDLVKSFEWGQDVESLDVLRQGFTHAFLMTFNKKEDYAAFQSHPNHVEFSEKFSTAIEKIVLLDFPSTLVKPVKEAEAEAAA* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3817 116 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
Tpr7g3817 116 SUPERFAMILY Dimeric alpha+beta barrel 6 101 IPR011008 -
Tpr7g3817 116 SMART Dabb_2 7 101 IPR013097 -
Tpr7g3817 116 Gene3D - 3 112 - -
Tpr7g3817 116 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
Tpr7g3817 116 PANTHER - 4 108 IPR044662 -
Tpr7g3817 116 PANTHER EXPRESSED PROTEIN 4 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3817 Tpr-Chr7 47286253 47287276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3817 - - pvu:PHAVU_005G126400g 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3817 7 47286253 47287276 Tpr7g3817 7 47286253 47287276 ECH
Tpr7g3817 7 47286253 47287276 Tpr4g1556 4 15491134 15492680 PCT