Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3671 ATGACCACTGCAAGCAGACTCAAATCCGTCGATTTTTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCTGGAGCAGGGTTATCCATAGTTGCAGCTCTCGCCATGGTGTTTTTATTTGGAATGGAACTTAATGAATATTTATCTGTCACCACCACTACATCTGTGATTGTTGACAAGAGTTCTGATGGAGACTTTTTAAGGATAGATTTCAATTTCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCGGTCGATGTGAGTGATGTGCTGGGAACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATCCAAATTTAAGACCCACGGGGCATGAGTTTCAACCAGGCCCGGCTACCAACGTCATTAAGCATGATGAGAAAGTGGATGAAGAATCCCTTGAAGGTGCTTTTGTATTCACGTCAGACAATTTTGATAAATATGCTCATCAATTTCCAATTACAGCTGTAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGATTGAGACCTTCATGGGAGAAGGCAGCTAAAATAATAAGAGAGAGACATGATCCGGAAATGGATGGTCGAATATTTATGGGGAAGGTAGATTGCACTCAAGAAGGAGACTTGTGCCGGAGGCATCACATACAAGGGTATCCGTCCATTCGTATCTTTCGTAAAGGAAGTGATATCAGAAGTGATCACGGACATCATGAACATGAGTCCTATTATGGAGATCGTGATACAGATAGCCTTGTTAAGACAATGGAGAATTTAGTAGCATCTCTCCCTTCAGAGTCTCAGAAGCTAGCTTTGGAGGATAAATTAAATGTTGAGAATGCAAAAAGAGCAGCACCATCAGCTGGAGGATGTCGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCAGGAAACTTGATCGTCTCAGCAAGATCTGATACCCATTCCTTTGATGCTTCTCAAATGAACATGTCGCATGTCGTACACCATTTATCTTTTGGAAGGAAATTGACACCTAGGGCTATGAGTGATCTCAAGCGTTTGATACCTTATATTGGTAACAGCCATGACAGGCTGAATGGTCTGTCATTCATCAATTCACATGATTTAGGAGCAAATATTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAAGTGATTACTAGAAAAGATTATCAATTAGTTGAGGAGTACGAGTACACAGCGCATAGCAGTGTAGCACACAGTTTACACATTCCTGTTGCGAGGTTCCATCTCGAGCTTTCCCCCATGCAGGTCTTGATAACAGAACAGCAGAAGTCTTTTTCACATTTTATTACGAACGTTTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTGCGGAATCGATTTTGCACAACACTATTAGGTTAATGAAAAAAGTTGAGCTGGGCAAGAATTTTTGA 1440 0.4056 MTTASRLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMVFLFGMELNEYLSVTTTTSVIVDKSSDGDFLRIDFNFSFPALSCEFASVDVSDVLGTNRLNLTKTVRKFSIDPNLRPTGHEFQPGPATNVIKHDEKVDEESLEGAFVFTSDNFDKYAHQFPITAVNFYAPWCYWSQRLRPSWEKAAKIIRERHDPEMDGRIFMGKVDCTQEGDLCRRHHIQGYPSIRIFRKGSDIRSDHGHHEHESYYGDRDTDSLVKTMENLVASLPSESQKLALEDKLNVENAKRAAPSAGGCRIEGYVRVKKVPGNLIVSARSDTHSFDASQMNMSHVVHHLSFGRKLTPRAMSDLKRLIPYIGNSHDRLNGLSFINSHDLGANITMEHYLQIVKTEVITRKDYQLVEEYEYTAHSSVAHSLHIPVARFHLELSPMQVLITEQQKSFSHFITNVCAIIGGVFTVAGIAESILHNTIRLMKKVELGKNF* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3671 479 CDD PDI_a_family 145 258 - -
Tpr7g3671 479 Gene3D Glutaredoxin 132 289 - -
Tpr7g3671 479 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Tpr7g3671 479 Pfam Thioredoxin 145 243 IPR013766 -
Tpr7g3671 479 Pfam Endoplasmic reticulum vesicle transporter 286 458 IPR012936 -
Tpr7g3671 479 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Tpr7g3671 479 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Tpr7g3671 479 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 479 IPR045888 -
Tpr7g3671 479 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3671 Tpr-Chr7 45471797 45479079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3671 - - gmx:100806869 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3671 7 45471797 45479079 Tpr7g3671 7 45471797 45479079 ECH