Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3657 ATGGAATCCATACTCGGTCGGGCTCTCGAATACACTCTCAAGTATTGGCTCAAATCATTCACCAGAGATCAATTCAAATTGCAAGGCCACACTGTTCGTCTTTCCAATTTAGATATCGACGGTGATGCTTTGCATTCTAGTGTTGGATTACCCGCGGCGTTGAATGTTGCATCTGCTAAAGTTGGGAAACTTGAAATAACGCTTCCGTCGGTGAGTAATGTGCAAACGGAACCAATTGTGATTCAAATTGATAAACTTGATCTTGTTCTTGAGGAGAATTCTGAGTTTGATGCATCTTCAAAACCAAATAGTTCTGCGCCTTCAGCTCCGCCTGCCAAGGGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGCATGACTATACAAATTCACACAGTTAATTTATTACTTGAAACTCGCGGAAGTTCTGGTCGCCAAGAGGGAGCAACATGGGCACCACCTATGGCATCTATGACCATACGCAACCTTATGATGTATACCACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCTCGGGAGTTCTCCAGTAAAAAAAAGTTCATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCGCATCCAGACATGTTCTTAGATGTTGAAGAGGGATCAAACTTGAGGGATGATGATGGCGCAAAAAGAGTTTTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTAAGAGAACTGAATTGAACAGTCCTCTTGGACTTGAGGTTCAATTGCACATCAATGAAGCTGTTTGCCCTGCGTTAAGTGAACCAGGACTGCGTGCACTTCTTCGCTTCATGACAGGAGTATATGTCTGTCTAAACAGGGGTGATGTTGATTTGAAGGCTCAACAGCGATCCACTGAAGCAGCTGGGTGTTCTCTTGTATCAATTGTTGTAGATCATATATTTCTTTGCATTAAAGATGCTGAATTCCGGCTGGAGTTTTTGATGCAGTCCCTCTTCTTCTCTAGGGCGAGTCTTTCTGAAGTAGATAACGACAAGAACTTGACCAAGATTACAATTGGTGGATTATTTTTGAGGGACACCTTTTCTAGTCCTCCATGTACTTTAGTGCAACCATCAATGCTAGCTGTCACGGGAGATGCTTTTCATGTGCCTGAATTTGCTAGAAGCTTTTGCCCTCCGATATATCCTCTAGGAGAACAACAATGGCAGTGTGCCGAGGGTACCCCTCTAATATGCCTCCATGCTCTCCAGATCATACCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCACTTATGATTCATCTCCAAGAAGAATCATGCTTGAGGATATCCTCTTTTATAGCTGATGGTATTGTTGTCAGTCCTGGTGACATTTTACCAGATTTCTCAGTGAAATCTTTTATTTTTACTCTCAAGGGATTGGATCTTACAGTTCCTTTTGACAAGGACAAATTGGATATTTCTAGAAGTGACATGGACAGTACAATCCATACCTCCTTTACTGGAGCAAGGCTTCATATTGAAAGCCTTTTATTTTTAGATTCACCTTCATTGATACTAAGAATGCTGAACCTTGAGAAGGATCCTGCTTGCTTTTGTCTTTGGGAAGGTCAACCAATTGATGCTACCCAGAAGAAGTGGACAGCCAAAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGCACGGGTACAAATGGACGCCAGACTGCAGGATTGTGGAGATGTGTTGATCTGACAGAGGCTTGCATTGAAGTAGCCATGGCAACAGTTGATGGAAGCCCGTTGTTAAACATTCCTCCTCCAGGGGGTATCGTCAGGGTTGGAGTTGCTTGCGAACAGTATTTGTCCAACACTTCTGTTGAGCAATTATTTTTCGTCCTAGATCTTTACGGTTATTTTGTAAAAGTTAGTGAAATGATGGCAACAGCTGGAAAAAGCAAACAACTGGAGGACGTTGGGGACAAATCTTTCAGCGGAAAGCTTTTGGACAAGGTTCCTAGCGACACTGCTGCGAGTTTCACAGTGAAAGATCTCCAACTTCGATTCTTAGAGTCTTCATCAATGAATGTGGAGGGACTGCCATTAGTGCAATTTGTTGGGGATAATCTGTTTACAAGTGCTACTCATAGAACCCTTGGTGGGGCTATTGTTGTTTCATCTTCTCTACGTTGGGAGAGTGTTGAGATAAGTTGTGTGGATGCTGAGGGGAAATTGGCATGTGAATCCTTGAGTTCTAGCATAAATGCTCCTTCACCGAGTGATAATGGATATCCACAACTAAGAGCTGTATTCTGGGTGCATAAGAACGAGAGACATTTAATGGATGGAAATGCTCGTTCTTTCCCTTTTCTGGACATAAGAACAGTTCATGTCATACCATTACACGAACAAGACTTGGAGTCTCATAGTTTAAATGTATCGGCTTTTGTATCCGGTGTTCGTCTTGGTGGGGGAATGAACTATACTGAAGCCGTACTACATAGATTTGGAATACTTGAGCCTGACGGAGCTCCTGGGAAGGGTCTATGTAAAGGTTTGGAAAACTTACAAAAGGGACCATTGTCAAAACTTTTTAATTCAAATCCTCTGATCGTTGATAATTCAAAAGATGTTAATAACTTTTTACCAGTTGAAAACACGGGGGAAGGGAAAGAAACAGGTTTTCCCCACTTGAAGAAGCCAGACGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTCGAAGGTGCAGAGGATATGGCTGAAAAGTGGTGGTTCTCCAGTCACGAAGATGAAGGAAGAGAAGAGAGGTGTTGGCACACATCTTTCCATAGTTTACAACTAAATGCAAAAAGTAGCCCGAAGAATGTTTCCGGTGGAAAAGGAAAAATACATAAAATACAGCATCATCCAGTAGAACTTGTTACGGTTGGAGTTCAAGGGCTGCAAATCCTGAAGCCTCATATCCAAAAAAACATTCCTTCATCAGTGGTAATTGGCAATGGGGTTAAGGAATTTATTGACACAGTTGGAGGAGTTGGTCTTGAAGTTCGATTGATATTAAGCGAGGAGAATGTTGATGATGAAACAGCTAATTGGGAAGTGGAAAATCTAAAATTCTCTGTAAAACAGCCGGTTGAGGCAGTTGTAACGAAGGATGAGCTTCAGCACCTTACTTTTTTGTGCAAATCTGAAATTGATTCAATTGGCCGGATAACTGCTGGAATTATACGGTTGCTAAAGTTAGAAAGCTCTGTTGGTCAGTCTGTAATAGATCAACTAGGCAACCTAGGAAGCGAAGGCATTGACAAGATATTCTCTGGTGAAAAGTTTAGTAGAGATGGTAGTATTGGTAGTCGAGGACTTTCTCCATTACCAAACCTGATAAGCGAAGAACCAAGCAAAACTCCTGAACAGACATTAACTTTGCTTGAGGAAGCAGTTATGGATTCACAGGCTAAAATCAATGATTTAATCAGTGATGTTGGTACTTCAGAGTCTTCTTCCTCTCAACACCTTACCATCGTCAAACTGAGTCAAAAGATCGAAAGTATGCAGGGCTTATTGATGCAATTGCGGAATCAACTTTAA 3630 0.416 MESILGRALEYTLKYWLKSFTRDQFKLQGHTVRLSNLDIDGDALHSSVGLPAALNVASAKVGKLEITLPSVSNVQTEPIVIQIDKLDLVLEENSEFDASSKPNSSAPSAPPAKGSGYGFADKIADGMTIQIHTVNLLLETRGSSGRQEGATWAPPMASMTIRNLMMYTTNENWQVVNLKEAREFSSKKKFIYVFKKLEWQSLSIDLLPHPDMFLDVEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIKRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDLKAQQRSTEAAGCSLVSIVVDHIFLCIKDAEFRLEFLMQSLFFSRASLSEVDNDKNLTKITIGGLFLRDTFSSPPCTLVQPSMLAVTGDAFHVPEFARSFCPPIYPLGEQQWQCAEGTPLICLHALQIIPSPLPPSFASQTVIDCQPLMIHLQEESCLRISSFIADGIVVSPGDILPDFSVKSFIFTLKGLDLTVPFDKDKLDISRSDMDSTIHTSFTGARLHIESLLFLDSPSLILRMLNLEKDPACFCLWEGQPIDATQKKWTAKASQLTLSLEACTGTNGRQTAGLWRCVDLTEACIEVAMATVDGSPLLNIPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYGYFVKVSEMMATAGKSKQLEDVGDKSFSGKLLDKVPSDTAASFTVKDLQLRFLESSSMNVEGLPLVQFVGDNLFTSATHRTLGGAIVVSSSLRWESVEISCVDAEGKLACESLSSSINAPSPSDNGYPQLRAVFWVHKNERHLMDGNARSFPFLDIRTVHVIPLHEQDLESHSLNVSAFVSGVRLGGGMNYTEAVLHRFGILEPDGAPGKGLCKGLENLQKGPLSKLFNSNPLIVDNSKDVNNFLPVENTGEGKETGFPHLKKPDDVDVTIELRDWLFALEGAEDMAEKWWFSSHEDEGREERCWHTSFHSLQLNAKSSPKNVSGGKGKIHKIQHHPVELVTVGVQGLQILKPHIQKNIPSSVVIGNGVKEFIDTVGGVGLEVRLILSEENVDDETANWEVENLKFSVKQPVEAVVTKDELQHLTFLCKSEIDSIGRITAGIIRLLKLESSVGQSVIDQLGNLGSEGIDKIFSGEKFSRDGSIGSRGLSPLPNLISEEPSKTPEQTLTLLEEAVMDSQAKINDLISDVGTSESSSSQHLTIVKLSQKIESMQGLLMQLRNQL* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3657 1209 Pfam N-terminal region of Chorein or VPS13 1 100 IPR026854 -
Tpr7g3657 1209 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1208 - -
Tpr7g3657 1209 PANTHER UNCHARACTERIZED 1 1208 IPR026728 -
Tpr7g3657 1209 Coils Coil 1188 1209 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3657 - - gmx:100811661 1947.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3657 7 45349129 45359439 Tpr7g3657 7 45349129 45359439 ECH