Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3656 ATGGGGATGAGGAATGATGGACACAAACAACAGCTTCTTCATCACCCAGGTGGTGTTGGAGTTGGAGTTGGTGGTGGTGGTGGAAGAACCAATGGTTTCATACCTAGCTCGTTTCGCGCTATTTCAAGCTACTTGAGGATTGTTTCCTCGGGTGCTTCCACGGTTGCACGCTCTGCTGCATCGGTTGCTTCATCGATTGTTGATAGGGAAGATGTTGCTGATCATGATCAGGTTATTTGGGCTGGTTTTGATAAGTTGGAGGGTGAGGGCGATACCGTTCAACAAGTACTTCTTCTAGGCTATCGGTCTGGCTTCCAAGTTTGGCATGTTGATGAATCAAATAATGTCCGGGACATGGTTTCCAAACACGACGGTCCCGTTTCTTTTATGCAAATGGTTCCAAATCCAATTGCATCAAAAAAATCAGAAGACAAATTTGCAAGCAGCCGCCCGTTGTTGGTCGTTTGTGCTGCCGATGGACTCTTCGGAGGAGGAAGCAATACTAAGGATGGATTGACTGGTCCTCTCAATGGAACTTCAAACTCTCATGATCAAATGAATGGCAACTATATGCCAACTAGTGTTCAGTTTTATTCTATGAAATCCCATTCATATGTTCATGTAATGAAGTTTAGATCCGTTGTTTATTCCGTAAGGTGCAGTTCTCGAATAGTTGCCGTTTCTCAATCCACTCAGATACATTGTTTCAATGCTACCACATTAGAAAGGGAATATACTTTACTTACTAATCCAATAGTGATGACTTGTCCTGGTTCCGGAGGCATAGGATACGGACCGCTTGCGGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGTCCAGTTGCAATCTCCACTTCCAGCCATGTCAGCCCGCAGCACTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGAAGCATGATTGCGCACTATGCCAAAGAATCAAGCAAGCATCTTGCTACTGGGATTGTTACCCTTGGAGATATGGGATATAAAAAACTTTCTAGATACTGTTCTGAAAACAATGGTTCACTACAATCTGTAAATTCTGGATCAAAGGTCAATGGAAACATTAACGGCCATTCGGCTGATTTAGATAACATTGGAATGGTCATTGTTAAAGATATTGTCACTAAAAACGTTGTTGCCCAATTCCGAGCACAGAAAAGTCCAATTTCAGCTTTATGCTTTGATCCTAGTGGCACCTTATTAGTGACCGCTTCTGTTCAGGGTCATAACATAAATGTTTTTAAGATAATGCCTATGCGTGAGAATTCGTTAGCATCTGATGCCGGTCCTTCCCACGTTCATTTATACAGGCTGCAACGCGGTTTTACAAATGCGGTTATACAAGATATTAGTTTTAGTGCTGACAGCAAGTGGATTATGATTAGTTCCTCGAGGGGCACTAGTCATCTATTTGCAATAAATCCTCAAGGAGGATATGTAAATATTCAGTCGAATGATGATACAAAAAATAGTGGATTAAGCACTACGACTAATCAAGTAGTTCGCCGGGATCCTATGGCAGCTGTACAAATGCCTAAACAGCAGAGCCTGTATGTAGCCGGCCCTCCAATTACACTTTCTGTAGTAAGCAGAATTAGGAATGGAACTAACGGTTGGAGAGGTACGGTAAGTGGTGCTGCTGCAGCTGCAGCCGGTAGGAAGAGTTCCCTTTCTGGGGCTATTGCTTCGTCTTTCCGTAATTGTAAAGGAAATGGATTGCTATATCGTGAAGGGAACAATTCCAAGGCAAATCATCACTTGTTAGTCTTTTCACCTAGTGGATCGATGATTCAATACGCTCTTCGGACAATAAATGGTCAAGATTCGGCTGTTGTTTCTGGATTATCTCCTGCTTATGAATCCAATCCACAGGCCGATGCAAGATTAGTAGTTGAGGCCATGCATAAATGGAATATATGTCATAGTCATAGTCGCAGAGAGCGAGAAGATAATGTTGACATATATGGCGAAAATGGAATTTCAGACAGCAGCAAAATATATCCGGAGGAAGTAGAGGAGAACATCATTAATCCTAAAATAAACAATGGTGTAATAAAAGCGAATCCCTCTCTCAAGGAACAGCATCATTTGTATATTTCAGAAGCTGAACTACAAATGCATCAAACTCAGATTCCATTGTGGGCAAAGCCAGAGATATATTTTAATTCAATGTTGAAAGAGTCGACCATAATGGATGAAGAAGATGCTTCAGGAGAATTTGAGATTGAAAGAATTCCCACTAGCATGATTGAAGCTAGACCAAAAGACTTGGTTCCAATTTTCAATTATATGCAGACTCCAAAATTTCAACAAACAAGGGCTCCTGCTATGGATAAAAAGATAAATGGACAAGTGTTGCACCACGGTTCTGAGCCGTATGGAAATGGAAGGATATCACCTAGGAGTATTTCGGGATCTCTCGAGGGCATGAATAATTCTGATGGTGAAGTTAATGAACATAAAAGTCAAATAGAAGGAACTGAATGGGATAATCATGTGATGCCATCAGAAACTATTGGCTTTGTAAATAACAATGACACCCTTAAACCAAATACTCAGCAGCATGAGATTGTAAATAATAGAAGAGAGCACTTAAGCATGGGGGCTCGTCTCATGCATGTAAATAGCGACAAAAGGCCTGAAGATGAGCATCATTTTGAAGAAGAAAATGAAGATGAATCTGATTGA 2703 0.414 MGMRNDGHKQQLLHHPGGVGVGVGGGGGRTNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVDREDVADHDQVIWAGFDKLEGEGDTVQQVLLLGYRSGFQVWHVDESNNVRDMVSKHDGPVSFMQMVPNPIASKKSEDKFASSRPLLVVCAADGLFGGGSNTKDGLTGPLNGTSNSHDQMNGNYMPTSVQFYSMKSHSYVHVMKFRSVVYSVRCSSRIVAVSQSTQIHCFNATTLEREYTLLTNPIVMTCPGSGGIGYGPLAVGPRWLAYSGSPVAISTSSHVSPQHLTPSASFPGFSSNGSMIAHYAKESSKHLATGIVTLGDMGYKKLSRYCSENNGSLQSVNSGSKVNGNINGHSADLDNIGMVIVKDIVTKNVVAQFRAQKSPISALCFDPSGTLLVTASVQGHNINVFKIMPMRENSLASDAGPSHVHLYRLQRGFTNAVIQDISFSADSKWIMISSSRGTSHLFAINPQGGYVNIQSNDDTKNSGLSTTTNQVVRRDPMAAVQMPKQQSLYVAGPPITLSVVSRIRNGTNGWRGTVSGAAAAAAGRKSSLSGAIASSFRNCKGNGLLYREGNNSKANHHLLVFSPSGSMIQYALRTINGQDSAVVSGLSPAYESNPQADARLVVEAMHKWNICHSHSRREREDNVDIYGENGISDSSKIYPEEVEENIINPKINNGVIKANPSLKEQHHLYISEAELQMHQTQIPLWAKPEIYFNSMLKESTIMDEEDASGEFEIERIPTSMIEARPKDLVPIFNYMQTPKFQQTRAPAMDKKINGQVLHHGSEPYGNGRISPRSISGSLEGMNNSDGEVNEHKSQIEGTEWDNHVMPSETIGFVNNNDTLKPNTQQHEIVNNRREHLSMGARLMHVNSDKRPEDEHHFEEENEDESD* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3656 900 SUPERFAMILY WD40 repeat-like 95 479 IPR036322 GO:0005515
Tpr7g3656 900 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g3656 900 SMART WD40_4 380 420 IPR001680 GO:0005515
Tpr7g3656 900 SMART WD40_4 202 237 IPR001680 GO:0005515
Tpr7g3656 900 SMART WD40_4 436 477 IPR001680 GO:0005515
Tpr7g3656 900 MobiDBLite consensus disorder prediction 879 900 - -
Tpr7g3656 900 Pfam Breast carcinoma amplified sequence 3 526 764 IPR022175 -
Tpr7g3656 900 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 867 IPR045142 GO:0006914
Tpr7g3656 900 Gene3D - 90 507 IPR015943 GO:0005515
Tpr7g3656 900 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 3 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3656 Tpr-Chr7 45330585 45337101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3656 - - gmx:100784596 1327.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3656 7 45330585 45337101 Tpr7g3656 7 45330585 45337101 ECH