Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3653 ATGCAGCTGCATATATCACCAAGTTTGAGGCATGTTACTGTGCTACCAGGGAAAGGGCTTAAAGAGTTTATCAAAGTGAAAGCTGTGTCGAAGCGCCTTTCTTATAGGATGATGTTCTATTCACTTTTGTTCTTCACTTTTCTTTTGAGGTTTGTGTTTGTTTTAACAGCTGTTGATGGCATTGATGGAGAAAACAAGTGCTCTACTATAGGTTGTCTAGGAAAAAAGTTAGGACCAAGGATTTTGGGTAGACGACCTGAATCATCGGTCCCAGAAGTGATATTCCAAACTTTAGATGAACCTCTTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAATTCATGATTAAAATGAAGGAAGGTGGATATGATGCAAAGACATTTGCAGTGAAACTTAGAGAAATGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAATATCTATATCGACATGTAGCGTCGAGCAGCATACCGAAACAACTTCATTGCCTTGACTTGAGGTTGGCACATGAGCATACGAATAATGCGGCAGCACGTCTTCAGCTACCGTCTGCAGAACTAGTTCCTGCTCTTGTCGACAATTCCTATTACCATTTTGTCGTAGCCTCAGATAACGTGCTCGCCGCTTCGGTGGTTGCAACGTCACTCGTTCGTAACTGTTTACGACCTAGGAATGTTGTTATACACATAATTACAGACCGAAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATCCTCTAGCGCCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTCGATTGGTTTTCAAAGGGAAAGGTTCCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTTCGGTCGCAGTTTAGAGGAGGTTCATCAGCTATAGTAGCAAATACATCTGAGAAGCCAAATGTTATTGCATCAAAACTACAAGCACTTAGTCCCAAATATAATTCAGTGATGAACCACATTCGGATACATCTACCAGAGTTGTTTCCAAGTCTTAACAAGTTGGTCTTCCTCGACGATGATATTGTGGTACAAACTGATCTTACGCCTCTGTGGGACATTGACATGAATGGAAAAGTAAATGGAGCAGTGGAAACATGTCATGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCTCACCCTCTAATATCAAAACATTTCAATCCTAATGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATACATATCATTATTGGGTTGGGCAGAACATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACATTATAGATCCTTTCTGGCATATGCTTGGATTAGGATATCAGGAAAATACAAATTTTGCTGATATTGAGAATGCTGGTGTTATCCATTTCAATGGAAGGGCAAAGCCATGGCTAGACATAGCTTTTCCACAACTAAGGTCATTGTGGACAAAATATGTTGACTTCTCAGATAAGTTCATTAAAAGCTGTCACATTAGAAAATGA 1599 0.4021 MQLHISPSLRHVTVLPGKGLKEFIKVKAVSKRLSYRMMFYSLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRRPESSVPEVIFQTLDEPLGNDELKGRFDIPQTLEEFMIKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVVASDNVLAASVVATSLVRNCLRPRNVVIHIITDRKTYYPMQAWFSLHPLAPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIASKLQALSPKYNSVMNHIRIHLPELFPSLNKLVFLDDDIVVQTDLTPLWDIDMNGKVNGAVETCHGEDKFVMSKRLKSYLNFSHPLISKHFNPNECAWAYGMNIFDLEAWRKTNISNTYHYWVGQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTNFADIENAGVIHFNGRAKPWLDIAFPQLRSLWTKYVDFSDKFIKSCHIRK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3653 532 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 530 IPR029993 GO:0047262
Tpr7g3653 532 SUPERFAMILY Nucleotide-diphospho-sugar transferases 207 530 IPR029044 -
Tpr7g3653 532 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 530 - -
Tpr7g3653 532 CDD GT8_like_1 207 519 - -
Tpr7g3653 532 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
Tpr7g3653 532 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3653 Tpr-Chr7 45312508 45316036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3653 1 531 Glycosyltransferase AT5G54690 77.861 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3653 K20867 - gmx:100802623 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3653 7 45312508 45316036 Tpr7g3653 7 45312508 45316036 ECH