Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3626 ATGGCTTCACAAAACACTCAACAAGTTCAATTTCAAGACTCATTACCCTTGATGGCAAATAAGCTTGGTGGGGATGGATTAATTGATGAACTATGCAATGGTTTCAATCTTTTGATGGATTCTAACAAAAGGGTTATTACTTTTGAAAGTCTTAAGAAGAATTCAGCTTTGTTTGGATTACAAGATTTAAGTGATGAAGATCTTCAATCAATGATTGTTGAAGGTGATTTTGATGGTGATGGTGCTCTTAATCAATTGGAGTTTTGTGTTTTGATGTTTAGACTTAGTCCTGAACTTATGGATGGGTCTAAATTATGGTTGGAAGAAATGCTTCAACAAGAAATTAAAGATTTTTTCTAA 360 0.3278 MASQNTQQVQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSNKRVITFESLKKNSALFGLQDLSDEDLQSMIVEGDFDGDGALNQLEFCVLMFRLSPELMDGSKLWLEEMLQQEIKDFF* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3626 119 SUPERFAMILY EF-hand 4 92 IPR011992 -
Tpr7g3626 119 Pfam EF-hand domain pair 43 94 IPR002048 GO:0005509
Tpr7g3626 119 Gene3D - 8 118 - -
Tpr7g3626 119 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Tpr7g3626 119 PANTHER CALCIUM-BINDING PROTEIN KIC 4 118 IPR044205 GO:0005509
Tpr7g3626 119 PANTHER CALCIUM-BINDING PROTEIN KRP1 4 118 - -
Tpr7g3626 119 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3626 Tpr-Chr7 44980706 44981312 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3626 2 114 EF-hand Containing Proteins AT5G54490 61.404 8.08e-47 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3626 K24345 - gmx:100500465 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3626 7 44980706 44981312 Tpr7g3626 7 44980706 44981312 ECH