Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3618 ATGGAATTAAATTTTGGTATGGATTTTGAGGATTACTTTCCATCCATGATTGCACGTTTTGGAGCAGAAGGGTTTATAAATGAACTTTGCAACGGCTTTCGTTTGCTTATGGATGTGAACAAAGGTCTTATAACATTTGAGAGCTTGAAGATGAATTGTTCCATGCTTGGTTTGGAGGTTAGGGATGATGAGCTAGTTTGCATGCTAATGGAAGGTGATTTGGATGGAGATGGTGCTTTAAATCAAATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGTTTAATGGGTGGACCTAAAATTTGCACTAGTACTCATCAAGGTGTGGATTCCATGTCAATGTGA 348 0.3822 MELNFGMDFEDYFPSMIARFGAEGFINELCNGFRLLMDVNKGLITFESLKMNCSMLGLEVRDDELVCMLMEGDLDGDGALNQMEFCILMFRLSPCLMGGPKICTSTHQGVDSMSM* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3618 115 Gene3D - 7 107 - -
Tpr7g3618 115 PANTHER CALCIUM-BINDING PROTEIN KIC 5 105 IPR044205 GO:0005509
Tpr7g3618 115 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 5 105 - -
Tpr7g3618 115 SUPERFAMILY EF-hand 11 99 IPR011992 -
Tpr7g3618 115 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Tpr7g3618 115 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3618 Tpr-Chr7 44824188 44824758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3618 9 107 EF-hand Containing Proteins AT5G54490 57.426 6.32e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3618 K24345 - gmx:100794479 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3618 7 44824188 44824758 Tpr7g3618 7 44824188 44824758 ECH