Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3589 ATGGCCAACTTCCTCGCTCAGTTCCAAACCATCAAAAACTCCTCCGATCGCCTCGTCATTTCCGTGGAGGATGTGAGTGATTTGTGGCCAACTGTCAAGCCTGCTTTTGAAGGGCGGTTGCCGTTCAAAAGGGCGAGTTTGAATAACAAGACGAGGAACCCTGTTTTGGTTGAGAAGTTGCCGGCTGAGTTCATATTAACTACAGATTCAAGGCTCCGTAGCCGGTTTCCTCAGGAACAGTTGTTGTTTTGGTTTCGAGAGCCATATGCAACTGTTGTGCTTGTTACGTGTGAGGATCTTGATGAGTTCAAAACCATCCTTAAACCACGCCTAAAATTAATTGTCCAGAATGATGAAAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCAACCAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGATTTTAGCTCCAGAAAAAGAGAAAGATGCTGCAAATATGATATGCTTTTCCCTGAAGCAAATTTTTGGGAGGATCTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGGATAGGCGTGTACAGTTTTATGAAGATGAGATACGGAAGCTCAGTGAACAGCGCCTCATGCCCGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCCTTTATCTTTGAAATGGCCCACCTTCATGAAGATGCCTTACGGGAATATGATGAACTAGAACTTTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAAAGAGACTTTGGTGGGGCAGACCACGGTGACGATCAGGCAGCAATTATTAATCCAGGAAACAAAGCATTGACACAAATTGTCCAAGAGGATTCGTTTAGGGAGTTTGAATTCAGACAGTATCTGTTCTCCCGTCAATCAAAGCTCTTATTCAAGCTAAATCGACCTATTGAGGTAGCATCACGAGGTTCTTCATTCATATTAAGCTTCTCAAAATCCTTGGCATTGCATGAGCGTATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATTACTGCTTGCGTGGCATTAATTGAAGCCACCACTTCCAACTATAGTGATGGACTTGTGGCACCTGACGTAGAGAAGGAGTTCTTTCGTCTTCTTGGTGATCTATATTCACTAGCCAGAGTTAAGTTCATGAGGCTAGCATATTTAATTGGGTATGGATCTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTTTGGCCTTCAGTTCCTGCTGATGCATCAGCAGAGGTACTTGAGAAAGAAAAGTTGATTCTCCAAACAACTTCTGCAACCAAGCACTTTGGTATCCAGAGGAAACCCCTGCCCCTTGAACCTACTGTGCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCCGCTGGAAATGTTTTTGAAGTGTTTGACAGTCGCCAGGGTCCAATGGAAGGATCAGGTTTTGATGCATCCCCCAAGATGTCACCACAAAAAGTACTTTCGAATCCGATGACACGCACTAATTCTTCTCCGGGAAACTTTGAGGGCTCAATTGACCGACCTATGAGGCTTGCCGAGATTTTTATTGCTGCTGAACATGCTTTGAAGAAAACAATTTCTAATCTTGAGATGTTAAAATCATTATCATCATCCGAGGAGTTTGAGAAAAAATATCTAGAGCTAACTAAAGGTGCTGCTGACAATTACCACCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCTGCTGTTGCCTTTAAACATGGACATTTTGACCAAGCTGCAAAGTCATATGAGAAAGTTTGTGCACTGTATAATGGGGAAGGATGGCAGGAGTTATTGGCTGAGGTCCTTCCCATTCTAGCCGAGTGTCAGAAGATTCTTAATGATCAAGCTGGCTACTTGCTATCCTGTGTGCGGTTACTTTCTCTTGAAGATGGATTATTTGTGACGAAGGAGCGTCAAGCTTTTCAGGCAGAAGTGGTTCGTCTTGCCCATAGTGAAATGAAGGACCCTGTTCCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTGTGCGATAGGGATCCTGGTATCCTTTCTGTAACTGTCTGCAGTGGTTTTCCAGATGATATAACTCTCGACTCAATCAGTCTTACATTAATGGCAACATCTAATGCAGACGAAGGTGTAAAGGCGTTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGGAATACTATTACCTTGGATTTACCACCTCAGAAACCAGGATCATATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATGGGTTTTCAAAAGTTGGTCCTGCAGAGAGTGATGATGTTATGAGTTATGAAAAGCCAGCTAAACCCATTTTGAAGGTTTCCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTAATAAATGAACACCAATGGCTTGGCATTTTAGTCCGGCCATTAAATTACTCCCTAAAGGCTGCTGTCTTGCATATTGATACCGGTCCAGGATTGGAGATCGAAGAGACGCAGATAGTTGAGATGGAAAGCTATGCTGGTGTATCAGAGAATGATGATGACGAGGTGCAGAAAGATGGTGCTCAAATAGATTCTTTGAATTCTGAGAAAAAGTTTGAACGGTCGACTCTTCATGATGGTAAAATTGTGTTTCCAAATTGGGCAAGCAACACTCCTTCTATACTTTGGGTTCTAATTCGTGCCATCAGTGACACGCTGAACAGAGGATCATCTTCAGTCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATTGCTCTAAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACACATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCATCTACGATGCTTGGCTTGATCTTCAAGATGGATTTGTTCATTCTGGACAATCTGAGGGTAGACCTAATTCAAGCTTCTTCCCACTAATCATATCTCCTACTTCCAAAGGAGGAATTTTGTTTAGTATCTTCCTAGACAAGACAAATGCAGAAGAAGCCGTGAAGCAACCAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGATCAATTGGAGCCCATCCTCCTTTTATAAATGAATCTACTGGAGTTGATGGTGCTAGACAGGAGTTGATCTTCAAGAGTGTAATTGTTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCCGTTGGTTTTCTTCCTCTCCCTTCAGATGGCATAAGAGTTGGACAACTAGTTAAGATGCAATGGAGGGTGGAAAGGTTGAAGGATTTGAATGAAAAAGAAATTTCTGAACAGAAGAATGATGAGGTGCTGTATGAGGTAAATGCAAATTCTGGTAATTGGATGATTGCTGGAAGGAAAAGAGGGCATGTATCTCTCGCCAAAAATCAAGGTTCAAGGATAATTATCACAGTATTATGCATGCCACTCGTGGCTGGTTATGTGCGTCCCCCTCTACTTGGGCTGCCGGAAATTGATGAGGCGAATATAAGGTGCAAACCGTCCGGGCCACATCTAGTTTGTGTTTTGCCACCAACACTCAGTTCATCCTTCTGCATTCCTGTTAATTCATGA 3777 0.4249 MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEGRLPFKRASLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSKAHPANDQATKMAKKVYAKLEVDFSSRKRERCCKYDMLFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFIFEMAHLHEDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAAIINPGNKALTQIVQEDSFREFEFRQYLFSRQSKLLFKLNRPIEVASRGSSFILSFSKSLALHERILPFCMREVWVITACVALIEATTSNYSDGLVAPDVEKEFFRLLGDLYSLARVKFMRLAYLIGYGSDIERSPVNSASLSLLPWPKPAVWPSVPADASAEVLEKEKLILQTTSATKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVFEVFDSRQGPMEGSGFDASPKMSPQKVLSNPMTRTNSSPGNFEGSIDRPMRLAEIFIAAEHALKKTISNLEMLKSLSSSEEFEKKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYNGEGWQELLAEVLPILAECQKILNDQAGYLLSCVRLLSLEDGLFVTKERQAFQAEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVCSGFPDDITLDSISLTLMATSNADEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHGFSKVGPAESDDVMSYEKPAKPILKVSKPRALVDLDAAVSSALLINEHQWLGILVRPLNYSLKAAVLHIDTGPGLEIEETQIVEMESYAGVSENDDDEVQKDGAQIDSLNSEKKFERSTLHDGKIVFPNWASNTPSILWVLIRAISDTLNRGSSSVTTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTHPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHSGQSEGRPNSSFFPLIISPTSKGGILFSIFLDKTNAEEAVKQPESILNIKYGISGDRSIGAHPPFINESTGVDGARQELIFKSVIVLQRPVLDPCLAVGFLPLPSDGIRVGQLVKMQWRVERLKDLNEKEISEQKNDEVLYEVNANSGNWMIAGRKRGHVSLAKNQGSRIIITVLCMPLVAGYVRPPLLGLPEIDEANIRCKPSGPHLVCVLPPTLSSSFCIPVNS* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3589 1258 PANTHER BNAC09G30770D PROTEIN 1 1256 - -
Tpr7g3589 1258 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1256 IPR045126 GO:0048193|GO:1990071
Tpr7g3589 1258 Coils Coil 185 205 - -
Tpr7g3589 1258 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1139 1217 IPR022233 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3589 K20307 - gmx:100787264 2249.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3589 7 44480778 44492813 Tpr7g3589 7 44480778 44492813 ECH