Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3578 ATGCAAACTTCTTTGGCAATAAGTAGAAACTTATTCAACCATCATAGAAAAGCAACTCAAATTATGGCAACAAGATTAATGGAACCAAGTGATGTTTTTCTTAACCATAGAAGCACCGATACGAAGAGAACGGTCGCAACTCGTCTTTATGACAACCTTAAAAGACATGGTATAAACTCTTTCTTGGATGAAAAGAGCATGAAACCGGGTGATAAATTATTTGAGAAAATAAACAATGGAATCATGGAGTGTAAGATTGGTGTAGCGGTTTTCTCTCCACGTTATTGTGAGTCTTATTTTTGTCTCCATGAACTTGCACTTTTAACGGCGCTTAATAAGAAGGTTATTCCTATATTTTGTGATGTTAAGCCTTCTCAATTGAGGGTTGTTAATAATACAAAATGGTCGAAGGAGGAACATAGGAGATTTAGATGGGCTCTTGATGAAGCTAAGTACACTGTTGGACTCACCTACAATTCTTCAAAAGGGAACTTGTCCGAATTTGTGACTAATGCTTCAGAAATAATCATTGGAAGCATGATAGAACTTGAGAATGAAGAGGCTGAAAAACATCAATATACCTATATGGCTTTAGTTCCTAAGTATAATTCAAGCATCTGCTATATGGCTTTAGTTTCTAAATTTTTAGCTTTTGACAATTGA 663 0.3514 MQTSLAISRNLFNHHRKATQIMATRLMEPSDVFLNHRSTDTKRTVATRLYDNLKRHGINSFLDEKSMKPGDKLFEKINNGIMECKIGVAVFSPRYCESYFCLHELALLTALNKKVIPIFCDVKPSQLRVVNNTKWSKEEHRRFRWALDEAKYTVGLTYNSSKGNLSEFVTNASEIIIGSMIELENEEAEKHQYTYMALVPKYNSSICYMALVSKFLAFDN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3578 220 ProSiteProfiles TIR domain profile. 28 176 IPR000157 GO:0007165
Tpr7g3578 220 Pfam TIR domain 31 176 IPR000157 GO:0007165
Tpr7g3578 220 PANTHER COP-1 INTERACTING PROTEIN 26 197 - -
Tpr7g3578 220 Gene3D - 27 182 IPR035897 -
Tpr7g3578 220 PANTHER COP1-INTERACTING PROTEIN-RELATED 26 197 - -
Tpr7g3578 220 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 152 IPR035897 -
Tpr7g3578 220 SMART till_3 29 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3578 Tpr-Chr7 44384419 44386219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3578 19 156 Miscellaneous Gene Families AT1G57830 31.250 1.61e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3578 - - ccaj:109788850 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3578 7 44384419 44386219 Tpr7g3578 7 44384419 44386219 ECH