Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3572 ATGGCCCTTCAAGCTGCTTCTTTGCTTCCTGCTTCTTTCTCCATTCCTAAAGAGGGAAAGATTGGTGTTAAGGATTCAACTCTTTTTGGTGTTTCATTGTCTGAATCTTTGAAAGGTGACTTTAGCTCTTCTGCATTGAGGTGCAAGAGGGAATTGCGACAAAAAGCTGGTGTTGTGAGGGCAGAGACAGCGGCTACAGCTACTCCATCAGTTACCAAGTCATCACCTGATGGCAAGAAAACATTGAGGAAAGGAAATGTTGTGATCACTGGTGCTTCATCTGGATTAGGTTTGGCTACTGCTAAGGCTTTGGCTGAGACAGGAAAATGGCATGTAATTATGGCTTGCAGGGATTTCCTTAAAGCTGCAAGAGCTGCAAAATCTGCTGGAATGGCTAAGGAAAGCTACACAATCATGCACTTAGACCTTTCCTCTCTTGACAGTGTTCGCCAATTTGTCGATAACTTTAGACGATCCGAAATGCCACTGGATGTGCTTGTTAACAATGCTGCTGTTTACTTGCCAACTGCTAAGGAACCTACATTCACTGCTGATGGCTTTGAACTTAGTGTTGGGACAAATCATCTCGGGCATTTTCTTCTTTCACGCCTTTTGCTCGACGACATTGGCAAATCTGATTACCCTTCAAAGCGTTTGATCATTGTTGGCTCAATCACAGGTAACACAAACACATTGGCCGGAAATGTACCTCCGAAAGCTAACCTCGGTGACCTGAGGGGACTTGCCGGTGGCTTGAATGGGCTTAACAGTTCTTCCATGATAGATGGTGGAGATTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTGTGTAACATGCTCACAATGCAAGAGTTCCATAGAAGATACCATGAGGAAACTGGAATCACATTTGCTTCCCTTTACCCTGGTTGTATTGCCACAACAGGCTTGTTTAGGGAGCACATTCCTTTGTTCAAAACTTTGTTCCCTCCATTCCAAAAGTACATAACCAAAGGATACGTCTCAGAAGATGAAGCAGGAAAGAGACTCGCTCAGGTTGTAAGTGATCCAAGCTTAACCAAATCTGGTGTTTACTGGAGCTGGAATAAAGCTTCTGCTTCATTTGAAAACCAGCTATCTCAAGAGGCTAGTGATGTAGAGAAGGCTCGCAAGGTGTGGGAGGTTAGTGAGAAGCTTGTTGGTTTGGCCTAA 1194 0.4439 MALQAASLLPASFSIPKEGKIGVKDSTLFGVSLSESLKGDFSSSALRCKRELRQKAGVVRAETAATATPSVTKSSPDGKKTLRKGNVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAARAAKSAGMAKESYTIMHLDLSSLDSVRQFVDNFRRSEMPLDVLVNNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDIGKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFKTLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDVEKARKVWEVSEKLVGLA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3572 397 Pfam short chain dehydrogenase 87 229 IPR002347 -
Tpr7g3572 397 PRINTS Glucose/ribitol dehydrogenase family signature 86 103 IPR002347 -
Tpr7g3572 397 PRINTS Glucose/ribitol dehydrogenase family signature 161 172 IPR002347 -
Tpr7g3572 397 PRINTS Glucose/ribitol dehydrogenase family signature 294 311 IPR002347 -
Tpr7g3572 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 364 IPR036291 -
Tpr7g3572 397 Gene3D - 72 397 - -
Tpr7g3572 397 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 83 397 IPR005979 GO:0016630
Tpr7g3572 397 CDD LPOR_like_SDR_c_like 84 396 - -
Tpr7g3572 397 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 396 - -
Tpr7g3572 397 PANTHER - 1 396 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3572 Tpr-Chr7 44297840 44300473 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3572 K00218 - gmx:100785637 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3572 7 44297840 44300473 Tpr7g3572 7 44297840 44300473 ECH