Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3571 ATGGCTGATCGCTTCTTTCCGAACGACTTGCCACCACCATTGGTGTCAGAGACCATACTTGAAGAAGCAACCTCTTCCCAAACACCAACACCACACTCTCTCACCTCACTCCTTTCTCTACCTTACACAACACTAACCTCAAAGCTTCAAGCTGCAGCACTTCACTTCAAACAATCGGTGGTGAATGAGACATGGGGTTCAAGTGGGAACCGTGTGAAGGACTATACTCTTTACACGGGGGTTCTTGGAACAGCATATCTGGTTTTTAAGGCCTATCAAGTAACCAAGAATGTGGATGATCTTAACTTATGCTTGAAGATTGTTAAGGCTTGTGATTCTGCTTCAGCAAATTCAAGTTACAGTCTTGTCATGATATGGGAGAATGGAAGTAAGGTGATTCTAGTTTTATTTGCTAATGAATTGAGTTGCAGTCGCGTGACATTCATCTGTGGCCGTGCTGGTGTTTGTGCTCTTGGTGCTGTCATAGCTAAGCATGTTGGTGATGAGAGATTACTTGACTATTACCTTAGACAATTCAAAGAGATTGAGCTACCCCGTGATTTGCCCTATGAGGTATTGTATGGCAGAGCAGGTTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTAAAGACACAATACCTAGTACTCACATGAGACCAATTGTGGATGAAATTATAACATCGGGTAGAAAATTGGCTCACAAGGGAAGATGTCCTTTGATGTATGAATGGCATGGGAAGAAATATTGGGGTGCTGCTCATGGACTTGCAGGAATCATGAATGTGTTGATGGACATGGAACTCAAGCCAGATGAGGTTGAAGATATCAAGGGTACACTACGCTACCTGATTAAGAATCGGTTCTCGAGTGGCAATTATCCCTCCAGTGAAGGAAGTGAATATGACCGCCTTGTGCATTGGTGTCATGGTGCTCCTGGAGTAACTCTTACGCTTGTAAAAGCAGCTGAGGTTTTTGGGGATATTGAATTTTTGCAAGCAGCTAAAGAGGCAGGTGAAGTAGTATGGAAGAGGGGTCTTCTTAAGCGAGTTGGAATTTGCCACGGCGTCAGTGGGAACACGTATGTCTTTCTTTGTCTTTACAGATTGACAGGAAACAAGGAGTACTTGTACAGGGCTAAAGGATTTTCTTGCTTTCTACTTGATAATGCACAAAAATTGATTGCTGAAGGAAAGATGCATGGGGGAGATCGCCCTTATTCGTTATTCGAAGGTCTTGGAGGACTGGCTTATACCTTTCTAGACATGATTGATCCACAAGTTGCAAGGTTCCCTGGCTATGAACTTTGA 1314 0.4315 MADRFFPNDLPPPLVSETILEEATSSQTPTPHSLTSLLSLPYTTLTSKLQAAALHFKQSVVNETWGSSGNRVKDYTLYTGVLGTAYLVFKAYQVTKNVDDLNLCLKIVKACDSASANSSYSLVMIWENGSKVILVLFANELSCSRVTFICGRAGVCALGAVIAKHVGDERLLDYYLRQFKEIELPRDLPYEVLYGRAGYLWACSFLNKHIGKDTIPSTHMRPIVDEIITSGRKLAHKGRCPLMYEWHGKKYWGAAHGLAGIMNVLMDMELKPDEVEDIKGTLRYLIKNRFSSGNYPSSEGSEYDRLVHWCHGAPGVTLTLVKAAEVFGDIEFLQAAKEAGEVVWKRGLLKRVGICHGVSGNTYVFLCLYRLTGNKEYLYRAKGFSCFLLDNAQKLIAEGKMHGGDRPYSLFEGLGGLAYTFLDMIDPQVARFPGYEL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3571 437 CDD euk_LANCL 77 433 - -
Tpr7g3571 437 SUPERFAMILY LanC-like 69 437 - -
Tpr7g3571 437 SMART LANC_like_2 71 437 IPR007822 -
Tpr7g3571 437 PRINTS Eukaryotic LanC-like protein family signature 220 235 IPR020464 -
Tpr7g3571 437 PRINTS Eukaryotic LanC-like protein family signature 286 301 IPR020464 -
Tpr7g3571 437 PRINTS Eukaryotic LanC-like protein family signature 323 344 IPR020464 -
Tpr7g3571 437 PRINTS Eukaryotic LanC-like protein family signature 368 386 IPR020464 -
Tpr7g3571 437 Gene3D - 1 437 IPR012341 GO:0005975
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 74 92 IPR007822 -
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 190 205 IPR007822 -
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 251 267 IPR007822 -
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 306 326 IPR007822 -
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 352 365 IPR007822 -
Tpr7g3571 437 PRINTS LanC-like protein superfamily signature 407 424 IPR007822 -
Tpr7g3571 437 PANTHER LANC-LIKE PROTEIN GCL2 1 437 - -
Tpr7g3571 437 Pfam Lanthionine synthetase C-like protein 72 437 IPR007822 -
Tpr7g3571 437 PANTHER LANC-LIKE PROTEIN 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3571 Tpr-Chr7 44294186 44297228 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3571 - - gmx:100786158 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3571 7 44294186 44297228 Tpr7g3571 7 44294186 44297228 ECH