Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3561 ATGTCGAAGAAGAAACAGAAGAAGAGAGCAAGAAAAGTTAACGGGATGAAGAAGAAAGAAAGAAATGTTAACGTCTCCGGAAAACCAAAGCATTCTCTTGATGTTAACCGGAGCAATGTCGCCACAAAAAATTCCCGATCTGCGGCCACTGTTCGCCGTCTCAAAATGTACAAAAACAGACCTGTTCGCTGTCGTAGAGGAAGAGTTTTATCTAACGAGTATCAATCTAAGGATCTTCCTAATACAAGAATTCAACCTGATCCTCGTTGGTTCGAGAATACTCGTGTTATAGGTCAGAAAGAGCTTGATGGTTTTAGAGAAGAAATGGATAAGTATAAGTCGAGTAATTATAATGTTATTACTAAGGGGAAGAATTTACCATTGTGA 387 0.3876 MSKKKQKKRARKVNGMKKKERNVNVSGKPKHSLDVNRSNVATKNSRSAATVRRLKMYKNRPVRCRRGRVLSNEYQSKDLPNTRIQPDPRWFENTRVIGQKELDGFREEMDKYKSSNYNVITKGKNLPL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3561 128 MobiDBLite consensus disorder prediction 1 16 - -
Tpr7g3561 128 MobiDBLite consensus disorder prediction 1 48 - -
Tpr7g3561 128 Pfam NGP1NT (NUC091) domain 56 128 IPR012971 -
Tpr7g3561 128 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 20 128 IPR024929 GO:0005730
Tpr7g3561 128 PANTHER GTP-BINDING PROTEIN-RELATED 20 128 - -
Tpr7g3561 128 MobiDBLite consensus disorder prediction 29 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3561 Tpr-Chr7 44212251 44213145 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3561 K14537 - pvu:PHAVU_011G1777001 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3561 7 44212251 44213145 Tpr7g3561 7 44212251 44213145 ECH