Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3550 ATGGAGGTTGACCAGGAGAATCTTCAGATTCCCGAAACCATTCTCTACACCACCCTCAGTCCACTTCCTCTCACCGCCGATGATCCCCCAGATTCCAACAACCACGAACAATACTCCGTTTTCCGCAACGAAATTTCTCTCGATACTCCCCAAGTCGATTCGGTTTATTCAACTGCCCCTGATTTCTTCTCCCTCGATGTCGCCGATGAAGCCGAAGCCGAAGACCCCCTCCCCGAGCCGAAAACGCCGGCTGAGCCAAAAACGCCGGCTATTGAACACGAGCCGACGCTAGAAGGTGGTTGGTTTCGTGGGAATGGCAAATTCAGAAGTCCCATGCTTCAGCTTCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCACCTACTCCAGAAGAGAAAGCTAAACGTGATGCAGCAATAGAATCTGTTTTTGAAGTTATAAAACATATATGGCCTCATTGTCAGGTTGAAATTTTTGGGTCTTTCAGGACAGGGCTGTACCTTCCAACTAGTGATATTGATGTTGTGATTCTGAAATCAGGCTTACCGAATCCGCAGATTGGTTTGAATGCAATTTCTAGATCATTGTCACAGAGAAGTATGGCAAAAAAGATACAGGTCATTGGAAAGGCTCGCGTGCCAATTATTAAATTCGTTGAAAAGAAGAGTGGTCTTTCCTTTGATATAAGTTTTGACATAGACAATGGACCTAAAGCTGCCGAGTATATTCAGGAAGCAGTGGCTAAGTGGCCTCAACTACGGCCGCTGTGTTTGATTTTGAAAGTATTTTTACAACAAAGAGAACTTAACGAGGTATATTCTGGTGGGATTGGTTCGTATGCCCTCCTTACCATGCTGATGGCGATGTTACGGAATGTTCGTCAGAGCCAACCTACTGCAGAGCACAACTTAGGGGTCCTTTTGGTACATTTTTTTGATTTTTATGGACGTAAATTAAATACCTCAGATGTTGGTGTATCGTGTATTGGAGAAGGCACCTTTTTCCGAAAGAGTAGTAGAGGGTTTTACAATAAAACACGGCCATTTCTTCTCGGCATTCAGGATCCTCAGACTCCAGATAATGACATTGGCAAGAACTCCTTCAATTACTTCCAGGTTAGGTCAGCATTTTTAATGGCTTTCACAACTTTGACAAATCCCAAGGTCATCCTGAGCTTAGGACCTAACAGGAGTATTCTTGGCACTATAATAAGACCAGACCCTGTCTTGATGGAGCGTAAAGGCGGGTCAAACGGAGAGATGACTTTTAATAGTTTGCTTCCTGGTGCTGGTGAGCCAATACAACAGCAGTACGGAGAGCACGATATGTTATGCAATTGGCAGTTAGATTTTGAAGAAGAACCGCTACCACGCGGAGATGGAGAAAACACCGGCGCAGAGCCCAGCAGGCGCTCTTCCAAGAAAAAGAGAAAATCTGCATCTAAGGAGAATAAGGAAAACAGGGACTCTCGCAAAAATAAGGAAAATAGTTCTATGACAGAAAACGGTGTACATAAGAAACATAAGAAAAAACGGGCTAAACATATTAGGTCGGAGGCTAGTTGCTAA 1569 0.4385 MEVDQENLQIPETILYTTLSPLPLTADDPPDSNNHEQYSVFRNEISLDTPQVDSVYSTAPDFFSLDVADEAEAEDPLPEPKTPAEPKTPAIEHEPTLEGGWFRGNGKFRSPMLQLHKEIVDFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEIFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVEKKSGLSFDISFDIDNGPKAAEYIQEAVAKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQPTAEHNLGVLLVHFFDFYGRKLNTSDVGVSCIGEGTFFRKSSRGFYNKTRPFLLGIQDPQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILSLGPNRSILGTIIRPDPVLMERKGGSNGEMTFNSLLPGAGEPIQQQYGEHDMLCNWQLDFEEEPLPRGDGENTGAEPSRRSSKKKRKSASKENKENRDSRKNKENSSMTENGVHKKHKKKRAKHIRSEASC* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3550 522 MobiDBLite consensus disorder prediction 479 503 - -
Tpr7g3550 522 MobiDBLite consensus disorder prediction 457 522 - -
Tpr7g3550 522 Pfam Cid1 family poly A polymerase 303 361 IPR002058 -
Tpr7g3550 522 Pfam Nucleotidyltransferase domain 142 243 IPR002934 GO:0016779
Tpr7g3550 522 SUPERFAMILY PAP/OAS1 substrate-binding domain 251 390 - -
Tpr7g3550 522 Gene3D Beta Polymerase, domain 2 128 236 IPR043519 -
Tpr7g3550 522 SUPERFAMILY Nucleotidyltransferase 111 263 IPR043519 -
Tpr7g3550 522 PANTHER POLY(A) RNA POLYMERASE 91 512 IPR045862 GO:0004652|GO:0031499|GO:0043631
Tpr7g3550 522 Gene3D - 112 386 - -
Tpr7g3550 522 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 91 512 - -
Tpr7g3550 522 CDD NT_PAP_TUTase 135 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3550 K03514 - gmx:100811320 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3550 7 44042631 44049982 Tpr7g3550 7 44042631 44049982 ECH