Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3526 ATGAATCACCTCTTGGCCATGGCTACTGCTACCACTAGCTTTGGAACTGCGTGTTGTCTAAGAAGAGTAGTAACTCATGCTTTTGCACTTTCTCATTCTCATAATCTTCGCACCAATGCCAATCTCTCTTTTCAAAGAACCCTTACCTCTCATCTTCTCTCTGTTTCCACTTCTTCAGGTGCAAGCAAGACAGTACAAGCTTCAAAAGGAGAAGTAGATGTGTTGCTCAAGGGGGTTGGGGAGAAAAGTGTAGCAAATGAAGTCAAGCATGTTCTTGAGATGGCTAAACGAGCATCATTAAAACGAGAGATTCTCCATACAAATTTTCTAACCCCTCCAGTGCTGAAGGAATCTATGCAAGTATTGGAAAAATTAGCAGACATTAAAGCACTTGCTCAAGGAGGTTATCCACAGGCTGAGCGGTGCCGGATTTCTGTTGGACATCCAGATGAACTGACAAGTGATCCAGATGTTATTTCGGCATTGAGCATCACAGGGAACTTCAAGTTTGAGCCTTGCTCTCATGGTGACTTCCTTGGCTCAATTCTTGGTACAGGAATTACTAGGGAGAAACTTGGAGATATTATATTGCAGGGAGAACAGGGTGCTCAGATAATTGTTGTACCAGAACTTGTTGAATTTCTTATGGCAGCACTGGATAAGGTTCGTAATGTTCCTGTAACGTGCACCAAGATACCATTAATTTCTCTTGATTATGAACCACCAAGAACAAAATCATTCAAAACTACAGAAGCTTCACTAAGAGTTGATGCAGTTGCTAGCGCAGGATTTAAGATTTCACGTTCAAAGCTAGTTGACATGATCAGCAATGGCGATGTACGTATCAACTGGATCCCAATTACTAGCAAAGGAACCACAATCAAGAGTGGAGATCTTGTATCAGTTAGTGGATTGGGGAGATTAAAGATAGGAGAAGTAAACACCACAAAGAAAGGAAAGTTTGCAGTGGAGCTCATTCGATATTTGTAG 990 0.4162 MNHLLAMATATTSFGTACCLRRVVTHAFALSHSHNLRTNANLSFQRTLTSHLLSVSTSSGASKTVQASKGEVDVLLKGVGEKSVANEVKHVLEMAKRASLKREILHTNFLTPPVLKESMQVLEKLADIKALAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFKFEPCSHGDFLGSILGTGITREKLGDIILQGEQGAQIIVVPELVEFLMAALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTTEASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITSKGTTIKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3526 329 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 64 329 - -
Tpr7g3526 329 Pfam S4 domain 255 300 IPR002942 GO:0003723
Tpr7g3526 329 Gene3D - 247 304 IPR036986 GO:0003723
Tpr7g3526 329 SMART s4_6 254 316 IPR002942 GO:0003723
Tpr7g3526 329 SUPERFAMILY Alpha-L RNA-binding motif 113 316 - -
Tpr7g3526 329 ProSiteProfiles S4 RNA-binding domain profile. 254 320 - -
Tpr7g3526 329 TIGRFAM PS_II_S4: photosystem II S4 domain protein 84 327 IPR017506 -
Tpr7g3526 329 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 64 329 - -
Tpr7g3526 329 Gene3D - 155 237 IPR012677 -
Tpr7g3526 329 CDD S4 255 304 - -
Tpr7g3526 329 Pfam Putative RNA-binding domain in YlmH 159 234 IPR040591 -
Tpr7g3526 329 Gene3D - 81 148 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3526 - - gmx:100793767 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3526 7 43804953 43810937 Tpr7g3526 7 43804953 43810937 ECH