Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3515 ATGGCAGCAAGAACACCTCTGTTGGTGCCAATTGATGATAATGGAGAACAGAACACAAGAACTCAAACAGAGAGATGGTGGAACAAAGTATTGGATATAGAGGAAGCAAAAATTCAATTGATGTTTTCATTACCAATGATTCTTACAAACTTGTTTTATTATTTGATCACTTTGGTTTCTGTGATGCTTGTTGGTCATCTTGGTGAGCTTCAGTTAGCTGGTTCTACTCTTGCTAATTCTTGGTTTAGTCTCACTGGTGTGGCTGTTATGGTTGGTTTAAGTGGTGCACTAGAAACACTCTGTGGACAAGGATTTGGTGCAAATGAATATCACATGTTGGGAATTTATCTACAAGGCTCATGCATCATATCTTTCATCTTTTCTATCATAATATCAATTATTTGGTTCTATACAGAACACATTCTAGTGTTACTTCATCAATCACAAGACATTGCTAGAACAGCTGCACTCTACATGAAGTTTCTCATACCAGGATTATTTGCATATAGTATCTTACAAAACATGTTGAGATTTCTACAAACACAATCTGTGGTAATGCCACTGGTTATTCTTTCAGCTATTCCAGCATTGGTTCATGTTGGAATTGCATATGGATTTGTTGAATGGACAAGTTTGAATTTCATAGGTGGACCAATTGCAACTTCTATTTCACTTTGGATATCAATGATAATGTTAGGATTATATGTCATATATGCAAAGAAATTTGAGAATACATGGAAAGGATTTTCAATGCAATCATTTCATTACCTGCTTACAAACATAAAACTAGCTCTGCCCTCAGCAGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTTTTAGTTTTCTTAGCTGGAATAATGCCTGATGCACAAATAACAACTTCATTGATTGCAATATGTGCAAACACAGAATTCATTGCTTACATGATCACTTATGGTCTTAGTGCTGCTGCAAGCACAAGGGTATCCAATGAATTGGGAGCAGGCCAACCAGAAAGAGCTAAACAAGCAATGGGAGTCACTCTAAAGCTTTCTCTACTTCTTGGTTTTTGTTTTGTTTTGATGCTTTTATTTGGTCATGATATATGGATTCAGCTGTTTAGTAATAGTCCTATTATCAAAAAGGAGTTTGCTTCAGTAACACCATTACTTGCTATTTCCATACTATTAGATTCTATCCAAGGTGTCTTATCAGGGGTGGCTAGAGGATGTGGTTGGCAGCACTTAGCTGTTTATGTCAACCTTGCAACTTTTTATCTCATTGGTTTGCCAATTTCATGTCTCCTTGGATTTAAGACCAATTTGCAGTATAAGGGTTTGTGGATTGGTCTAATTTGTGGCCTGGTGTGTCAAACTGGGACACTGTTACTTTTGACAAGATATGTCAAATGGACTAAATTGAACGTTTCAGACGATAAAGATAATGACCAACTCATTGTTGCATAA 1449 0.3644 MAARTPLLVPIDDNGEQNTRTQTERWWNKVLDIEEAKIQLMFSLPMILTNLFYYLITLVSVMLVGHLGELQLAGSTLANSWFSLTGVAVMVGLSGALETLCGQGFGANEYHMLGIYLQGSCIISFIFSIIISIIWFYTEHILVLLHQSQDIARTAALYMKFLIPGLFAYSILQNMLRFLQTQSVVMPLVILSAIPALVHVGIAYGFVEWTSLNFIGGPIATSISLWISMIMLGLYVIYAKKFENTWKGFSMQSFHYLLTNIKLALPSAAMVCLEYWAFEVLVFLAGIMPDAQITTSLIAICANTEFIAYMITYGLSAAASTRVSNELGAGQPERAKQAMGVTLKLSLLLGFCFVLMLLFGHDIWIQLFSNSPIIKKEFASVTPLLAISILLDSIQGVLSGVARGCGWQHLAVYVNLATFYLIGLPISCLLGFKTNLQYKGLWIGLICGLVCQTGTLLLLTRYVKWTKLNVSDDKDNDQLIVA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3515 482 PANTHER PROTEIN DETOXIFICATION 18 476 - -
Tpr7g3515 482 Pfam MatE 45 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g3515 482 Pfam MatE 266 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g3515 482 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 476 - -
Tpr7g3515 482 TIGRFAM matE: MATE efflux family protein 45 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr7g3515 482 CDD MATE_eukaryotic 35 467 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3515 Tpr-Chr7 43707476 43711360 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3515 K03327 - gmx:100816310 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3515 7 43707476 43711360 Tpr7g3515 7 43707476 43711360 ECH