Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3499 ATGAACAGATGCATTTCAAATTTCGATTTTCACGTCACGCTTAAACCTAACCCTCATATCTCCCTCCAAAATTCCCCTTTCGCGGAACTCCGACACCACCAATCCATCGGAACAACCATGGCGTCAACTTCACACGGCGGCACTTCTGGTCGTATAAAGAACTTAACTTCCACCTTCGGCTCCGATATTCAACCACTCGTTGCGGAAATCCGAACAACAGTGGGTGTGATGAAGGATATTGCAGTTCAATTGGAAAAAGACAATCTTCCAGACAAGGTGAAGGAGACGGAAGATGCTGTTGTTGAGTTAGTTGGCTTATCTGAACACAGTGTGCATTTTTCATCTGCTGTTCAAGCTTTTGGTAATAGATACAAGCCTGGAGAACAGTTGACTGATTTTCATAAGGTGTTGGAAGATGAAGTTTTGCAGTTTAGGGCCAATCGAAATTCAGATGTTCAAAGAAATCCTTTAGTGCGCCAATTTAAGGAAGCTGTATGGAAAGTGCATCACAGCGGACAGCCAATGCCTGGTGAAGAGGAGGAAGACATTGTAATGACTAGTACCCAAACTAATATTTTGAATTTTAGTTGTCCAGTGAGTGGAAAGCCTATTACTGAGCTTGAAGAACCAGTTCGCAGCATGCAATGTAGGCACATTTATGAAAAGAAAGCGATAGTGCAATATATCAAGTCAATGAATAACCGTTCTCAATGCCCAATACCGGGTTGTCCAAAAGCGGTGGATGTAAATGTGCTGGTACAGGATCCGTCGTTGGCTGTGGATATTGATGAATTGCGAAGAACGAGCAACAAAGAAACTAATGTAGAAGATTTCACCATGCTTGATGAAGATTAA 855 0.4234 MNRCISNFDFHVTLKPNPHISLQNSPFAELRHHQSIGTTMASTSHGGTSGRIKNLTSTFGSDIQPLVAEIRTTVGVMKDIAVQLEKDNLPDKVKETEDAVVELVGLSEHSVHFSSAVQAFGNRYKPGEQLTDFHKVLEDEVLQFRANRNSDVQRNPLVRQFKEAVWKVHHSGQPMPGEEEEDIVMTSTQTNILNFSCPVSGKPITELEEPVRSMQCRHIYEKKAIVQYIKSMNNRSQCPIPGCPKAVDVNVLVQDPSLAVDIDELRRTSNKETNVEDFTMLDED* 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3499 284 Pfam Zinc-finger of the MIZ type in Nse subunit 181 243 IPR004181 GO:0008270
Tpr7g3499 284 ProSiteProfiles Zinc finger SP-RING-type profile. 179 273 IPR004181 GO:0008270
Tpr7g3499 284 PANTHER UNCHARACTERIZED 31 272 IPR026846 GO:0000724|GO:0019789|GO:0030915
Tpr7g3499 284 SUPERFAMILY RING/U-box 195 247 - -
Tpr7g3499 284 CDD SPL-RING_NSE2 195 264 IPR004181 GO:0008270
Tpr7g3499 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 278 IPR013083 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3499 K22756 - gmx:100804379 331.257
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3499 7 43478163 43483994 Tpr7g3499 7 43478163 43483994 ECH