Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3486 ATGAGAAACATTAATACAAAAGCAACATGCTTCATCACTATTCTCTTTCTTTCTATTATAGTATCATCAGTTCATGTTCAATGTCGTTCTCTTCCAAATGAATTGATTTCAAATGGAGTTGATGATGATGTTCAATCATCACAACAAGATTCTTATCTACTTCTTAATAATAATAATACTAGTAACAAATTTGAAGATTCAAATTCAGGAGAGTATTGTAAACAAATGTATGGTTTTTTACCATGTTCTAATAACATTTTTGGTCATTTATTTCTAATTTTGGTTTATGAGTATTTGTTGTTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATTTTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCTCTTCCAGAATCCTTAATTCTTCTTGTAACTGGACTTTCAAGTGATAAGGAGAGTGCACAAGAATATGCATCAACTGGTGTTGGTTTGTTAGCTGGATCATCCATCTTGCTTCTTACAGTAGTGTGGGGGACTTGTGTTATTGTTGGCAAGCAAAGCTTGAAAAATGACTCTATTTCTGTTACCTCATACTCATCAACAGAAAGAATAAAACAATCTTTGATTGGTTATGGGATTACTATGGATGTAGACACTAGAAAGATGGCAAGAAACATGGTTTTCTCTATTATACCACTTCTCATAATGCAGTTTCCTACATTATTCCATTTCTCTACAACATTACGCAGTGTTACCTTGATGATTTCTCTCATCATTGCTGTCACTTTTCTCATCTCATACTTCATTTACCAGATATTTAAGCCTCAGATAGAGAAAACAAGATTAGAATACATAAAGCATGATGATTTAATATTAAGAATTTTCCAACGTGTTGAAAAGCAAACTCTCCAAAAAATCCTAGCTGAGGATGGAACTCCCAATGTAACTGCCATAAGTGGGTTATACAGTGAATTCAGTCAACGCGGGGAAAAACATTTATCAGCTCTTGAAGTAAAAGAATTGTTGCTCGGGAACAATTTAACCGGTACAAATATCAGAGAGGACCAAATAAATGACATGTTAAAAGCTTTTGACAAAAATGGTGATCAAATTATAACCAAGGAAGAATTTGTTAGTGGCTTAACAGAATACATTAACCAAACAAAACATGCTTTGGATAGAAAGTATCTCCCCAAAGAATCTATGAACAAAATGTATCAGACTTTTATCAAGCCATGGATTGAACACACGAGAAAAGAACGCGCGTTGAAGCTACAACTTATTTCAGGAGTTTTAGATCATGCTCAGAATGATATGGTTGGTAGGTTGCTCAAAGATGACGGTACACCTGATAAAGATGCTATCAAAAGGTTGTTTGGGGAAGTCGATAGTGATGGCAGTAACAATGTTTCGAGGTCCGAACTAGAAAAAATAGTGAAGGAGACTCACTTTGGCAGGGGCGTAGATTCAGATGAAGCAGTCACAAAACTACTTCATGATCTTGATGTCAATAAAGACGATGAAATTAGCGAGAATGAATTTGTTGACGGCTTCACCAAATGGTTAAACTCAAATTCTAATCAAGCTGCTAGCTCAAAATCTTCTTCTCATGAACCTCATCAAACATGGGAAGAAGTTGAGAAGGTAATGGAAGGGAATCAAACCAAAGGTGTTTCTGCATGGTTAGAAGCTTTAGCATATGTGTTCTTGGGAATTATTATGCTGTCACTTCTTGCTGAGCCTCTAATACACAGTGTTCAGAATTTTTCTGAAGCCGCCGGAATTTCATCATTTTTCATATCTTTCATTATAGTCCCTTTAGCTACAAATTTTAGAGAAGCTACCTCAGCTATCAAAGAAGCTAGCCACAAGAAAAGTAGTAATACATCTCACACTATGTACGAGATTTATGGAGCAGTGTTTATGAACAATATTCTTGGATTTGTGGTGATATCTAGTCTTATATATATGAGAGATATTACATGGGAATTTTCAGCTGATGTATTGGTGGTGGCAATTGTTTGTATTGTGATGGGCCTAACTGCTAGTTTTCGTTCTACATTTCCTCTATGGACATCCATCCCTACATACATCTTGTACCTAATTTCATTGGTTTTGGTTTATGTTCTTAAAGATGTTCTCAATTATGTTTAG 2148 0.3529 MRNINTKATCFITILFLSIIVSSVHVQCRSLPNELISNGVDDDVQSSQQDSYLLLNNNNTSNKFEDSNSGEYCKQMYGFLPCSNNIFGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIVGKQSLKNDSISVTSYSSTERIKQSLIGYGITMDVDTRKMARNMVFSIIPLLIMQFPTLFHFSTTLRSVTLMISLIIAVTFLISYFIYQIFKPQIEKTRLEYIKHDDLILRIFQRVEKQTLQKILAEDGTPNVTAISGLYSEFSQRGEKHLSALEVKELLLGNNLTGTNIREDQINDMLKAFDKNGDQIITKEEFVSGLTEYINQTKHALDRKYLPKESMNKMYQTFIKPWIEHTRKERALKLQLISGVLDHAQNDMVGRLLKDDGTPDKDAIKRLFGEVDSDGSNNVSRSELEKIVKETHFGRGVDSDEAVTKLLHDLDVNKDDEISENEFVDGFTKWLNSNSNQAASSKSSSHEPHQTWEEVEKVMEGNQTKGVSAWLEALAYVFLGIIMLSLLAEPLIHSVQNFSEAAGISSFFISFIIVPLATNFREATSAIKEASHKKSSNTSHTMYEIYGAVFMNNILGFVVISSLIYMRDITWEFSADVLVVAIVCIVMGLTASFRSTFPLWTSIPTYILYLISLVLVYVLKDVLNYV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3486 715 CDD EFh 453 517 IPR002048 GO:0005509
Tpr7g3486 715 SUPERFAMILY EF-hand 333 520 IPR011992 -
Tpr7g3486 715 Pfam Sodium/calcium exchanger protein 563 706 IPR004837 GO:0016021|GO:0055085
Tpr7g3486 715 ProSiteProfiles EF-hand calcium-binding domain profile. 487 522 IPR002048 GO:0005509
Tpr7g3486 715 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 558 714 - -
Tpr7g3486 715 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 12 397 - -
Tpr7g3486 715 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 403 536 - -
Tpr7g3486 715 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Tpr7g3486 715 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Tpr7g3486 715 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 558 714 - -
Tpr7g3486 715 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 12 397 - -
Tpr7g3486 715 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 403 536 - -
Tpr7g3486 715 ProSitePatterns EF-hand calcium-binding domain. 363 375 IPR018247 -
Tpr7g3486 715 ProSitePatterns EF-hand calcium-binding domain. 500 512 IPR018247 -
Tpr7g3486 715 Gene3D - 391 532 - -
Tpr7g3486 715 Pfam EF-hand domain pair 451 514 IPR002048 GO:0005509
Tpr7g3486 715 Gene3D - 310 390 - -
Tpr7g3486 715 ProSiteProfiles EF-hand calcium-binding domain profile. 350 385 IPR002048 GO:0005509
Tpr7g3486 715 SMART efh_1 452 480 IPR002048 GO:0005509
Tpr7g3486 715 SMART efh_1 354 382 IPR002048 GO:0005509
Tpr7g3486 715 SMART efh_1 491 519 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3486 Tpr-Chr7 43335457 43342042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3486 403 708 EF-hand Containing Proteins AT1G53210 39.385 3.34e-61 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3486 - - gmx:100799062 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3486 7 43335457 43342042 Tpr7g3486 7 43335457 43342042 ECH