Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3415 ATGAAAACTAACTCTCTACTCTTCTACACTCTCATTCTACTTGCTTCCACTTTTTCTCTTCATTTTCAAGCTCACGCTGCTCCTGCAGGGCCATTGATTAAGCATTTATCTTCACTTATCAAATGGACAAGGTCTGCTACTACTAAGTCACCACATTCAGATGGGAATGTTCTTCAATTTGAGAATGGTTATGTAGTTGAGACTGTTGTGGAAGGAAATGCGATTGGAGTTATTCCTTATCGGATCCGTGTCAATGAAGAGGATGGTGAACTCTTTGCTGTTGATGAAGTTAATAGCAACATTGTTCGAATCACACCGCCACTGTCTCAATATAGTCGAGGAAGATTGGTAGCTGGTTCATTTCAGGGCTACACTGATCATGTGGATGGAAAACCTAGTGATGCTCGGTTTAATCATCCCAAAGGTATAGCTATGGATGATAAAGGGAATGTTTATGTTGCTGATACGCAGAATCTTGCCATCAGAAAAATCGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCTGGCTACAGGGATGGGCCGAGTGAAGATGCTAAGTTCTCAAATGATTTCGATGTAGTATATATTCGGCCAACATGTTCCTTGTTAGTAATTGATAGAGGAAATGCTGCTCTTCGGAAAATTATTCTTGACCAGGAGGACTGTGATTACCAATCAAGTTCAATTTCAAGCACAGATATCCTTACAGTTGTTGGCGCTGTTTTGGTTGGATATGCTACATGCATGCTTCAGCAGGGATATGGAGCCTCTTTCTTCTCAAAAACAAGACAATCAAGAAGAGAGTTTAAAGGCCACGTGAGCAACGAGAAACACGTGCCAATCCCAGAGAGCGGTAAAGAGGATCCTGGATGGCCATCTTTTGGGCAGCTTATTGCCGATCTTTCTAAGCTATCCCTTGAAGCTTTGGCTAGTACATTCACTCAATTCATACCCTCACACTTCAAATCTAACGGCCCCAAAACAGGACTAACACCGCTGAAGGATCGTCTTGTGATGCCCGAAGATGAAGTTGTGCCTCCATTGGTCAATAGAAAAAGCACTCCTGTTACTGTTACCGAAAATAGGCAGATGCCAAAGGTCCATACTCCGACCACTGCTGAGAAATATTCAGAAGTAAAGCCTCCAAAGATAAAATCAAGCAGTTTCAAGGACCCTGCGTTGTCAAGTAAGCACCGATCTTCAAAACGATCCGAGTATGCTGAATTCTATGGATCTGGTGAGGTTCCATCGTATGCTAAATCTAAGAGCCAAAAAGAAAGGACAAAACATCGGCACCGAGAAAAGAGTGGAGAAGTTGTTTTTGCAAAAAATGCAGCTGAGGCTAAACCTGTTGAGCCGAGGGCGGCTGTTGATCACAGCAATTCAAAATTTGATCGGTACAGTATGAGGACTAGTTATGTACCTGGAGAGTCATTCCGATTCAACTCTCAGTAA 1470 0.4272 MKTNSLLFYTLILLASTFSLHFQAHAAPAGPLIKHLSSLIKWTRSATTKSPHSDGNVLQFENGYVVETVVEGNAIGVIPYRIRVNEEDGELFAVDEVNSNIVRITPPLSQYSRGRLVAGSFQGYTDHVDGKPSDARFNHPKGIAMDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYIRPTCSLLVIDRGNAALRKIILDQEDCDYQSSSISSTDILTVVGAVLVGYATCMLQQGYGASFFSKTRQSRREFKGHVSNEKHVPIPESGKEDPGWPSFGQLIADLSKLSLEALASTFTQFIPSHFKSNGPKTGLTPLKDRLVMPEDEVVPPLVNRKSTPVTVTENRQMPKVHTPTTAEKYSEVKPPKIKSSSFKDPALSSKHRSSKRSEYAEFYGSGEVPSYAKSKSQKERTKHRHREKSGEVVFAKNAAEAKPVEPRAAVDHSNSKFDRYSMRTSYVPGESFRFNSQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3415 489 SUPERFAMILY NHL repeat 61 170 - -
Tpr7g3415 489 Pfam NHL repeat 137 163 IPR001258 GO:0005515
Tpr7g3415 489 Gene3D - 42 221 IPR011042 -
Tpr7g3415 489 PANTHER - 14 486 - -
Tpr7g3415 489 MobiDBLite consensus disorder prediction 349 464 - -
Tpr7g3415 489 PANTHER NHL DOMAIN-CONTAINING PROTEIN 14 486 - -
Tpr7g3415 489 MobiDBLite consensus disorder prediction 357 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3415 Tpr-Chr7 42354827 42360069 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3415 - - gmx:100797841 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3415 7 42354827 42360069 Tpr7g3415 7 42354827 42360069 ECH