Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3412 ATGTCGCAAATCGAAACCCTATCTCTGATTCACGAGATCGAATCTCTAATCTCCGATCAACTTCAAGTGGTTTCATACAAGTGGCTGAGTCGCAATTATCAGATATCATCTGATGAAGCAAAGAGGTTGCTTCATGAATTTGTTGAAAAACATGAGGGTGGGTTGGAAGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGTACTCATCGTAGTTACCACATAAGGCTTGTTACTGGACCAAAGCTAGCAGAAGCACAGCACGACTTTGATGGAAATTGCTCAGTCCAGGTATATAGTGTGCAACCCAGCATTCCAAAGGATCCAGCTGTGCTTTGGAATGCAGAATTCATTCAAGCAGAAGAGCTCTCCAAGCAGCCTTCCTCTGTTGATAATTGCTTGAGAGACAATAGGTTCTGTGGAATCTCTAACACTTTTGTACGAAGAAACGTGGATGGCCAACCGGCAGTTTCTGCCACTCCACAAATAAAATCTGTAGTAGGTTTGGGATCAACAAAGAGTAACGTTGTTCAACCACCTCCGAAAAACATAGCACACAATTCTATTGCGAAAGTTGATCTCAAATCACAGAATGTGGTGAAAGATTTCAAGAGTGAAAGCAATGGTACAGGGAATGCTGTAGTTCATGAAAACATCAATAAACCTACTGCAGAGAAAGAAAAGTCCCTTCTCTTGCCCACAGGAAAAAAGAAAGTTCAAGCTGATAAAAATGGCTCTGCTACCGGCGGTTCGTTGGCAAGCTTTTGGGGTCGTCCATCTGCAAAACCCAAGCCATGCTCTGTGCCAGCAGAAAATAGCAACACGATTTCGAATCCTTCTGAAGCTACTGAAAATGCCCAAACTTGTGCTAATGAAGCAGAAGCAGACAGTGATGATGACAATCAAGGTGTCCCCTTAAGAAGATCATCCAATAGGAAAAGGAGGGTTGTCTTTGATTTGTCAGATGAAGATGAAGATGTCGTCAATTTAGCATCACCTGAGGTCCCTAGTAAACAGTTGTCTCAAGATTCCAGACAAAATGACAAAAACCTGTTAGAGAAAGAACCTTTGAATTTTGATTTGCCGGTAGAAATTAAACCATTGGTTAAGGAAGAGAGAGTTGAGAAAAAAGTTTTCCAACCACCAAGAGAAGATTTATCAGTTATCACCAAGTGCACAACTGCTGGGAAATCATCTACTGAGAAGTTGCACAGTAGTGCTCCAGAAATTTGTGTAAAAAAGGATAGTGTAAAAATGGCCGCTCCAGATTCAACTAAGAGGAGAAAAGTGATGAAGACCAGGATTGATGAACGAGGAAGAGAAGTGACTGATGTATTCTGGGAGGGGGAGGAGATAGAGGCAAAGAAAGCTGATATGGTTACAGCAAAGAAGACTGATACGGTTGCAAAGAAAGCGGACAATAATGGATCTACCAATGCTGTCAACAGTGCACCGGCAACTAAGAAGCCACCAGCTACTGGAAAAGGAGGAAGCAAGAAAGCATTAAATTCAAAAGATCCCAAACAGGGCAATCTTCTTTCATTTTTCAAGAAAGTATGA 1557 0.4181 MSQIETLSLIHEIESLISDQLQVVSYKWLSRNYQISSDEAKRLLHEFVEKHEGGLEVVYALSGWLKSTHRSYHIRLVTGPKLAEAQHDFDGNCSVQVYSVQPSIPKDPAVLWNAEFIQAEELSKQPSSVDNCLRDNRFCGISNTFVRRNVDGQPAVSATPQIKSVVGLGSTKSNVVQPPPKNIAHNSIAKVDLKSQNVVKDFKSESNGTGNAVVHENINKPTAEKEKSLLLPTGKKKVQADKNGSATGGSLASFWGRPSAKPKPCSVPAENSNTISNPSEATENAQTCANEAEADSDDDNQGVPLRRSSNRKRRVVFDLSDEDEDVVNLASPEVPSKQLSQDSRQNDKNLLEKEPLNFDLPVEIKPLVKEERVEKKVFQPPREDLSVITKCTTAGKSSTEKLHSSAPEICVKKDSVKMAAPDSTKRRKVMKTRIDERGREVTDVFWEGEEIEAKKADMVTAKKTDTVAKKADNNGSTNAVNSAPATKKPPATGKGGSKKALNSKDPKQGNLLSFFKKV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3412 518 Pfam DNA polymerase subunit Cdc27 23 517 IPR019038 GO:0005634|GO:0006260|GO:0043625
Tpr7g3412 518 MobiDBLite consensus disorder prediction 470 485 - -
Tpr7g3412 518 MobiDBLite consensus disorder prediction 266 291 - -
Tpr7g3412 518 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 517 IPR019038 GO:0005634|GO:0006260|GO:0043625
Tpr7g3412 518 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 146 IPR041913 -
Tpr7g3412 518 MobiDBLite consensus disorder prediction 203 307 - -
Tpr7g3412 518 MobiDBLite consensus disorder prediction 462 518 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3412 K03504 - gmx:100812372 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3412 7 42339786 42344942 Tpr7g3412 7 42339786 42344942 ECH