Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3357 ATGCAAAGTCTAACAATGAACCAAACAGCGCTTTCACAACCAAGCCAATGGCACCAAACAAATCAACCAAATACAAACAGTTTCACCACCAAAAATCCAATCCAATTTCTTCGATTCCGCAACACAAACCACCAAAATCTCCAACTCCGTTTCGCCGTAAACCCTTCATCACAGGTTCCACCGGTCGTCGTTGTGGGATCCGCCAATGCCGATATCTATGTAGAGATCGACCGACTTCCCAAGGAAGGCGAAACTATTTCCGCTAAAAGCGGACAGACTTTAGCCGGCGGGAAAGGTGCTAATCAAGCTTCCTGCGGTGCTAAATTATCACATCCAACTTACTTCGTCGGTCAGGTTGGAAATGATGCTCACGGAAACCTCCTCGCCAATGCTCTCCGTGACGGTGGCGTTCGCCTTGATTATCTTACTGTTGTGCCTTCTGCCCCGACTGGTCATGCCGTTGTTATGCTTCAGTCTAGTGGCCAGAATTCTATTGTTATTGTTGGTGGAACTAATATGAGTTGTTGGCCTCAGACTCTGCCACCTCAGCATTTGGAGGTTGTTTCGTCAGCTGGGATTGTTCTGTTGCAGAGGGAGATTCCTGATTTTGTTAATGTTCAAGTGGCAAAGGCTGCAAGGAATGCTGGTGTCCCAGTAATATTTGATGCTGGGGGATTTGATGCACCAATTCCACAAGAATTGCTGGATTTTGTCGACATTTTTAGTCCTAATGAAAGTGAACTTGCTCGCCTTACAGGACTGCCAACTGAAAGTTTTGAAGACATTACACAGGCTGCTGTGAAATGCCATAAATTGGGAGTTAAGCAAGTTCTTGTGAAACTTGGTTCCAAAGGATCTGCCCTTTTCATAGAAGGAGAAGAACCAATTCAGCAACCTGCCATCTTTGCTAAAACAGTCATTGATACAACTGGAGCTGGCGATACCTTTACAGCTGCTTTTGCTGTAGCCTTAGTGGAGGGCAAGTCCAAAAAGGAATGCCTCAGATTTGCCGCTGCTGCAGCTTCTCTTTGTGTTCAAGTCAAGGGAGCCATTCCCAGTATGCCGGATAGGAAATCTGTTCTTGAACTTCTTAATCATCATTGA 1104 0.4565 MQSLTMNQTALSQPSQWHQTNQPNTNSFTTKNPIQFLRFRNTNHQNLQLRFAVNPSSQVPPVVVVGSANADIYVEIDRLPKEGETISAKSGQTLAGGKGANQASCGAKLSHPTYFVGQVGNDAHGNLLANALRDGGVRLDYLTVVPSAPTGHAVVMLQSSGQNSIVIVGGTNMSCWPQTLPPQHLEVVSSAGIVLLQREIPDFVNVQVAKAARNAGVPVIFDAGGFDAPIPQELLDFVDIFSPNESELARLTGLPTESFEDITQAAVKCHKLGVKQVLVKLGSKGSALFIEGEEPIQQPAIFAKTVIDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQVKGAIPSMPDRKSVLELLNHH* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3357 367 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 308 321 IPR002173 GO:0016773
Tpr7g3357 367 Pfam pfkB family carbohydrate kinase 62 356 IPR011611 -
Tpr7g3357 367 PRINTS Ribokinase signature 64 85 IPR002139 GO:0016301
Tpr7g3357 367 PRINTS Ribokinase signature 91 110 IPR002139 GO:0016301
Tpr7g3357 367 PRINTS Ribokinase signature 163 176 IPR002139 GO:0016301
Tpr7g3357 367 PRINTS Ribokinase signature 233 248 IPR002139 GO:0016301
Tpr7g3357 367 PRINTS Ribokinase signature 277 288 IPR002139 GO:0016301
Tpr7g3357 367 Hamap Ribokinase [rbsK]. 60 362 IPR011877 GO:0004747|GO:0006014
Tpr7g3357 367 SUPERFAMILY Ribokinase-like 61 364 IPR029056 -
Tpr7g3357 367 CDD ribokinase 66 356 IPR011877 GO:0004747|GO:0006014
Tpr7g3357 367 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 96 120 IPR002173 GO:0016773
Tpr7g3357 367 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g3357 367 PANTHER SUGAR KINASE 60 367 - -
Tpr7g3357 367 Gene3D - 59 366 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3357 Tpr-Chr7 41680798 41685646 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3357 K00852 - gmx:100801418 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3357 7 41680798 41685646 Tpr7g3357 7 41680798 41685646 ECH