Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3346 TTTTTCTTCTTCTTTTTTAAAACAAATTCCACACTGACAGACACTGTCGTCGTCGTCAAAGCTTCGAAGCTCAGCTCAAAACAACAGACGACAAAATGCAAGCATCAATCACATACTCACCACTTTCAACTAAATTTATCAAATTCAGAACAATCTTACAGCAACACAAACCAAACAATTTCTTCAAAACCAAATCCTATTTTGCATCAAACAAAACCATTTTCTCACCTAACACTATGCAATTTTCAACCTCAATCACCATTAAACCCTTCCACATCAAAATCCCCCAAAGTCTCCATCTCCAACTTGGGTCCACTTCGTTGCGGCATTTCATCGAACAGTGAGAGTGCAAATGTGGATGGGAGAAGTTTTAGGCAATGGGTTGAGGTTGCCGGTGAGGCGATATCGACGGCGTTTCCGTTATGGGTTACGATTGGGTGTGTGTTGGGTTTGTTGAGACCAAATTCGTTCAATTGGGTTACTCCTAAATTGAGCATTGTTGGACTTAGTGTAATTATGCTTGGTATGGGTATGACTTTAACTCTTGATGATCTTCGTTCTGCTCTTTCTATGCCTAAAGAAGTTCTTTCTGGTTTTTTCCTTCAATATTCGATAATGCCATTATCTGCATTTTTTATAAGCAAACTCTTAAATCTACCATCACATTATGCAGCTGGTTTAATATTAGTTGGGTGCTGTCCTGGAGGCACGGCTAGTAACATTGTAACGTATCTTGCACGTGGAAATGTGGCACTTTCTGTTGTAATGACAGCTGCAAGCACTCTATCAGCCGTGATCATGACTCCTTATCTGACAGCCAAACTTGCTGGTAAATATGTTGCTGTGGATGCAGCTGGCTTATTAATCTCGACATTGCAGGTTGTGCTTTTTCCTGTATTGGCTGGTGCACTTCTGAATCAGTATTTCCAACCTCTTGTTAAACTCGTGTCTCCATTGATGCCACCCTTAGCTGTAGCAACTGTGGCAATTTTATGTGGAAATGCAATTTCACAGAGTTCTTCTGCAATCCTTATGTCTGGTGGACAGGTTATCTTAGCTGTCTGCCTTCTTCATGCTTCTGGTTTTTTCTTCGGATACGTTCTTGCCAGGATTCTTGGTCTAGATGTGTCATCATCGCGAACTATATCCATTGAAGTTGGCATGCAGAACTCAGTTCTTGGCGTAGTTCTGGCTGCCAAGCACTTTGGAGATCCCTTAACAACAGTACCTTGTGCTGTTTCAAGTGTGTGTCACTCAATCTTCGGTAGCATCTTAGCAGGAATGTGGAGACGCTCTGTGCCACCTGAGATGAAGGTCAAGGACTGA 1326 0.4186 FFFFFFKTNSTLTDTVVVVKASKLSSKQQTTKCKHQSHTHHFQLNLSNSEQSYSNTNQTISSKPNPILHQTKPFSHLTLCNFQPQSPLNPSTSKSPKVSISNLGPLRCGISSNSESANVDGRSFRQWVEVAGEAISTAFPLWVTIGCVLGLLRPNSFNWVTPKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSIMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPYLTAKLAGKYVAVDAAGLLISTLQVVLFPVLAGALLNQYFQPLVKLVSPLMPPLAVATVAILCGNAISQSSSAILMSGGQVILAVCLLHASGFFFGYVLARILGLDVSSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRRSVPPEMKVKD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3346 441 PANTHER SODIUM-BILE ACID COTRANSPORTER 35 437 IPR004710 -
Tpr7g3346 441 Pfam Sodium Bile acid symporter family 167 341 IPR002657 GO:0016020
Tpr7g3346 441 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 35 437 - -
Tpr7g3346 441 Gene3D - 124 432 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3346 Tpr-Chr7 41606664 41610809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3346 107 438 Organic Solute Cotransporters AT1G78560 76.205 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3346 K03453 - fve:101292385 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3346 7 41606664 41610809 Tpr7g3346 7 41606664 41610809 ECH