Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2174 ATGGCTAGTACTAATCCTCGCCAGTTACAAGCTAACAAAATGCAGTTAAAGAAGGAGAGACGCATGTTCTCTACTTCTGATGATAGTGCCATGATGAAACAAGTTCAGTCCACTCATGCACCTGATGGTCGTGAAATTGATGTCAAACCCCTTATTCAAATTGTTGATGAAATCTTGATTCAAATCATTGCACGAAGTGTTGAGGGTCATCAACATGATCATGTTAAACATGAGCAAGAGAAATTGGAAACTGCTGCTGCTTTGGCTGAATTTGATATGCTTGATGCATTGGCTTTTATCATTAACAAAATTTCGTGTGAGCTATCATGCAAATGCTCAGGAGGTGGAGATGCACATGCATCAACAATGGTGTTACTAAATTACCTATCTAGCTATTCATGGCATGCAAAAGTTGTGTTAACCTTAGCAGCATTTGCTGTTATTTTTGGAGAATTTTGGCTTGTTGCTCAATCAAGTGTTTCAAACACACTTGCCAAATCTGTGGCTCTCCTTAAGCAACTACCTGACATAGTAGAGAATTCCGTTTCATTGAGACCACAATTTGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTTACTATGTGCATTGTTGAATTCAAAGAGTTACCATCTGAATATATTTCAGAAGATGTTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTACCTATTGGGTCATTAGAAGTATTGTGGCTTGTGCTTCACAAATTGCAAGTCTGATAGGCATGAGAAATGAGGCCATTTCATCAGCCTCAGAAGCATGGGAATTATCTAGTCTGGCTCACAAAGTTACTAGTATATATGAGCACCTCAAGAACCAACTTGCTATTTGCTATCAATATATAGATGAAAAGAGGCATATTGAGGCATTTCACAATCTGATACGTCTTTTCGAGACGATTCATGTAGACAACATGAAAATTCTGAGAGCATTGATTTATGCAAAGGATGATATTCCCCCACTTATAGATGGAACTACAAAGTTAAGGGTTAGTCTTGAGGTACTAAGGAGGAAACATGTGTTACTTCTGATATCAGATCTTGATATTTCACTAGAAGAGATTATGATACTTGATAATTTGTACAAAGATGCAAGATCTAGGGGTGAGACACACTATGAGATGGTATGGATTCCAGTTGTGGACAAAGCAACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAATCATCAATGCCGTGGCACAGTGTTCGCGACCCTTTCATTATTGAGCCATCAGTGATTAAGTATATAAAAGAAGTGTGGAATTACACAAAGAGAGCTATTCTAGTTGCTCTTGATCCACAAGGCAGATTGTCCTCCCAAAATGCTCTTCACATGATATGGATTTGGGGAAATTTGGCCTTCCCTTTCACAAGTGAAAAAGAAGAATCATTGTGGAAGCAAGAGATTTGGAGCCTCGAGCTTCTTGTCGATGGCATTGATCCCGCACTTTTGGACTGGATGACAGAAGGAAAAATCATATGTCTATATGGAGGCGAAGATCTAGAGTGGATAGAAACATTCACAAAAACAGCAATGAACGTAGCAAGAACAAGCAACTTCGATTTAGAGATGGTATACGTAGGAAAAAGCAATGCAAAAGAAAGAATGCAGAGGATGATAACCACCTTCAACAATAAAAAATTCAGTTACTTTTTTCCAAACGTGACATCCATTTGGTTCTTTTGGGCAAGACTTGAGAGCATGTTGTACTCAAAATTACAACATGGAAAGACAGTCGAAAACGACAAGATCATGAGTGAAGTTATGACAGTACTAAGCTTCGATGGTAGTGATCGAGGTTGGGCAATATTCTGTAGAGGACCATCTGAAATGGCTAGAGCTAAAGGTGATACTGCTTTAACAAGTTTGAGAGATTTTGATAAATGGAAACATAAGATTGAACAAGATGGTTGGGTTCCGGCATTGAATGATTATATTAAGGAAATTCAGCAACCACATCATTGTAACAGGCTTATTCTTCCTGGGAGTACCGGTGGAATACCACAGAAAGTTGTTTGTGCTGAATGTGGGCGCCAAATGGAAAAATATTTCATGTATCGTTGCTGCGTCGAGTGA 2121 0.3876 MASTNPRQLQANKMQLKKERRMFSTSDDSAMMKQVQSTHAPDGREIDVKPLIQIVDEILIQIIARSVEGHQHDHVKHEQEKLETAAALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYSWHAKVVLTLAAFAVIFGEFWLVAQSSVSNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMCIVEFKELPSEYISEDVPPMSVASAHIPIATYWVIRSIVACASQIASLIGMRNEAISSASEAWELSSLAHKVTSIYEHLKNQLAICYQYIDEKRHIEAFHNLIRLFETIHVDNMKILRALIYAKDDIPPLIDGTTKLRVSLEVLRRKHVLLLISDLDISLEEIMILDNLYKDARSRGETHYEMVWIPVVDKATWNEVNKQKFEYLQSSMPWHSVRDPFIIEPSVIKYIKEVWNYTKRAILVALDPQGRLSSQNALHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPALLDWMTEGKIICLYGGEDLEWIETFTKTAMNVARTSNFDLEMVYVGKSNAKERMQRMITTFNNKKFSYFFPNVTSIWFFWARLESMLYSKLQHGKTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDFDKWKHKIEQDGWVPALNDYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2174 706 Pfam Sieve element occlusion C-terminus 475 704 IPR027944 -
Tpr7g2174 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 10 705 IPR039299 GO:0010088
Tpr7g2174 706 Pfam Sieve element occlusion N-terminus 26 313 IPR027942 -
Tpr7g2174 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 10 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2174 Tpr-Chr7 28405048 28410053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2174 - - gmx:100811452 1179.85