Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2173 ATGAATGCGAGCTACAGCTATTTTCCTGTATTGGTGGCGTATGATTCCCGCGTCTCTTGTTGTTATGCTGCAACAACAACAACATCACGCACTTCTCATCACCGTTCTATTGTTTCTCTATCTTTATCTTTCTCATCCTCCAACCTCCTCTTCTTCCAAAACCCTAATTTCCTTACGGGGAACAACACTATCTTCGTTACGATGCAGCGGTTCTGCTCTGTGAGTGGCATAAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAACATTTTGGAGTAATCACATCAAGTAAGGTGGCTGAAGTAATGGAGAGTGTTGATAGAGCTTTGTTTGTACCCAGTGGATCAGCACCTTATGATGACAGTCCCATGGCCATAGGCTACAATGCCACTATATCTGCACCTCACATGCATGCTACCTGCCTTCAGTTGCTGGAAGAGAATTTGCAACCTGGGATGCACGCCCTCGACGTTGGCTCTGGAACAGGGTATCTGACTGCGTGTTTTGCCATGATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTAGAGCATATTCCTGAATTGGTTTCCCTTGCAAAAGAAAATATTCAGAAAAGTGCTGCAGCTACACTATTGAAAGATGGTTCCCTTTCTGTTCATGTCGGTGATGGAAGGGAAGGTTGGCCAGAATTTGCTCCTTATGATGTCATTCACGTTGGAGCAGCAGCACCAGAAATTCCTCAACCACTTATCGACCAGTTGAAGCCTGGTGGGAGAATGGTAATTCCTGTTGGTAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGGACTGAGACCTCCGTTCGTTATGTGCCCCTCACTAGTCGAGAAGCTCAACTTCGCAGCTACTAA 894 0.4575 MNASYSYFPVLVAYDSRVSCCYAATTTTSRTSHHRSIVSLSLSFSSSNLLFFQNPNFLTGNNTIFVTMQRFCSVSGISKNKAMVERLQHFGVITSSKVAEVMESVDRALFVPSGSAPYDDSPMAIGYNATISAPHMHATCLQLLEENLQPGMHALDVGSGTGYLTACFAMMVGPQGRAVGVEHIPELVSLAKENIQKSAAATLLKDGSLSVHVGDGREGWPEFAPYDVIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRSY* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2173 297 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 78 293 IPR000682 GO:0004719|GO:0036211
Tpr7g2173 297 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 18 297 IPR000682 GO:0004719|GO:0036211
Tpr7g2173 297 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 214 229 IPR000682 GO:0004719|GO:0036211
Tpr7g2173 297 Gene3D Vaccinia Virus protein VP39 74 297 IPR029063 -
Tpr7g2173 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 265 IPR029063 -
Tpr7g2173 297 CDD AdoMet_MTases 155 256 - -
Tpr7g2173 297 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 79 291 - -
Tpr7g2173 297 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 18 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2173 Tpr-Chr7 28391593 28395455 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2173 K00573 - gmx:100810913 461.455