Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2168 ATGTTTCTGTCTTGCTTTAAAACCATGATTATTATCTTATTCATCTTTGTTTGTGTTGGATTAAGCAATGGTGCCAATCAAAAAATACCCCTTCAAGGAAGAAAAGGCCAATGGCAACTGCTTCTCAACAACACAGGTGTCGTTGGTATGCATATGGCATTAACCTACGAAAACACCGTCATAATGTTCGACCAAACTGAAGCAGGCCAATCTAGGTACAAACTTCGTAAACGCTTCAATGGAACCATGTGTAAAACAAACCAACATGATTTAACTGATTCAACATGCTTTGCTCATTCAGTAGAGTATGATATCAGTTCCAATAGAATAAGACCTTTGAGGCTTGACACTGATCCTTGGTGTTCCTCTGGCTCTTTCCTAAGCAATGGAACACTTCTACAAACAGGTGGATTTCATCAAGGTGCTAAAAGGGTTAGATACTATAGACCTTGTGGTGGGAATCATCATCAATGTGATTGGATACAATCAAAGAAATCTCTATCTGATCAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACATGACAGAGTTGTTATTGTTGGCGGAAAAAGAGTTTTCACATATGAATTTGTGCCGAAAATTAGTCCTAATGAAAAATCTTTCAACCTTCCATTTCTGCACCAAACCAATGACAGGAATTCAGAAGGGAACAATTTATATCCATTCACTCACCTTTCGTCGGATGGAAACTTGTTCATTTTTGCAAACCGTGATTCCATCTTACTCAACTTGAGACGCAATAGAGTAATCAAGACGTTCCCTCGGATTCCAGGAAATGGGTCGAGAAACTACCCGAGTTCTGGCTCATCCGTGTTACTACCGTTAGACCATAAAGACAATTTCCATAAAGTTGAAGTTATGGTATGCGGAGGTTCTGCTACAGGAGCACTCAATGCTGCTAGAAGAAAAAGGTTCGTTGAAGGTTTAAGATCTTGTGGGAGAATGGTGATCACAGGGAATAAACACAGTTGGGAAATGGATTACATGCCGAAACCGCGTTTCTTACACGACATGCTAATTCTACCTACAGGTAACATCTTAATTGTAAATGGTGCTATAAATGGTTGTGCAGGATATGATAATGCTAGAAATGCTTCACTTGAACCTTATCTTTATAGTCCAAAAAAAAGACTAGGAAAAAGGTTCAGCGTACTTAAGAAAACAATGATAGCAAGAATGTATCATTCATCAGCAACTCTTCTTCCTGATGGTAGAGTATTAGTAGCTGGTAGTAACCCACATGGGAGATACACTTTTCACAATGCAGCATATCCAACTGAACTAAGACTTCAAGCATTTGTTCCACATTACATGGAAAAGAGGTATCATACTTGGAGGCCAAGTAACTTGACAATACAAAAGCATACAATTGGGTATGGTAAAGAGTTCAATGTGACGTTTTTGTTGGGGAAGAGGCCGAGCGATAATGTGAGGTTCAGTGTTTATTCACCGCCGTTTACTACTCATGCATTTGCCATGAATCAGAGGATGTTGAATCTGAGGTGCAAGAGGATGGTGAGAAGTAGTAAGGGGTGGGTGCATGCAGTATTGGAAGCTCCGCCATCATCTGTTGTTGCACCTTCTGGTTATTACTTGCTCACGGTGGTGAATGAAGGAATTCCAAGTTTGTCTCAGTGGATTCAGTTTGCACACGCTTAG 1683 0.4005 MFLSCFKTMIIILFIFVCVGLSNGANQKIPLQGRKGQWQLLLNNTGVVGMHMALTYENTVIMFDQTEAGQSRYKLRKRFNGTMCKTNQHDLTDSTCFAHSVEYDISSNRIRPLRLDTDPWCSSGSFLSNGTLLQTGGFHQGAKRVRYYRPCGGNHHQCDWIQSKKSLSDQRWYASSQILPEHDRVVIVGGKRVFTYEFVPKISPNEKSFNLPFLHQTNDRNSEGNNLYPFTHLSSDGNLFIFANRDSILLNLRRNRVIKTFPRIPGNGSRNYPSSGSSVLLPLDHKDNFHKVEVMVCGGSATGALNAARRKRFVEGLRSCGRMVITGNKHSWEMDYMPKPRFLHDMLILPTGNILIVNGAINGCAGYDNARNASLEPYLYSPKKRLGKRFSVLKKTMIARMYHSSATLLPDGRVLVAGSNPHGRYTFHNAAYPTELRLQAFVPHYMEKRYHTWRPSNLTIQKHTIGYGKEFNVTFLLGKRPSDNVRFSVYSPPFTTHAFAMNQRMLNLRCKRMVRSSKGWVHAVLEAPPSSVVAPSGYYLLTVVNEGIPSLSQWIQFAHA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2168 560 SUPERFAMILY E set domains 450 556 IPR014756 -
Tpr7g2168 560 SUPERFAMILY Galactose oxidase, central domain 101 446 IPR011043 -
Tpr7g2168 560 Gene3D - 32 451 IPR037293 -
Tpr7g2168 560 Gene3D Immunoglobulins 453 560 IPR013783 -
Tpr7g2168 560 Pfam Galactose oxidase-like, Early set domain 454 556 IPR015202 -
Tpr7g2168 560 Pfam Glyoxal oxidase N-terminus 50 299 IPR009880 -
Tpr7g2168 560 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 7 559 - -
Tpr7g2168 560 CDD E_set_GO_C 454 556 IPR015202 -
Tpr7g2168 560 PANTHER SECRETED PROTEIN-RELATED 7 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2168 Tpr-Chr7 28329772 28331902 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2168 - - mtr:MTR_3g075520 965.296