Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr7g2116 | ATGAAGAGAAGAACAACATCAATCATCTTCTCCAATCTCCACCGTCGTTTCCATCAATTTCCACTCACCACCGCCGCCAATTTCTCAACAACTCCCCGCCCTTTTCCTGACCACTCCCCACGAAACCCTTCCGTCACAGACACTGACCTCATCCGCCACGTCACCACAACCATCAAACGACGCCGTCTTGAACCTCTTCGTCGTGTTCTCAAACCTTACGAATCTCGCTTCAAACCAAGCCATCTCATTTGGGTTCTCATCAACATAAAAAACGATTACAAACTTGTATTAAATTTTTTCAACTGGGCAAAATCACGTTCAGAAGAAGAACAACAACTTCACCCTACTTTGGAATCGCTTTGCATTGTTGTTCATATAGCTGTTGCTTCAAACGACGTTGAAACTGCTAAAAGACTTGTTTTTGAGTTTTGGGCTAAGCCGCGTTTGGATGTTTTGAAATCTTTTGAGCTTTTTACTGAGAGGTTAGTTTATACTTATAAAGATTGGGGTTCACATCCTCTTGTTTTTGATGTGTACTTTCAAGTGCTTGTTGAAACTGGGTTTGTTTTAGAAGCTGAGAAACTTTTTCATAAGTTATTAGGGTACGGTGTTGTTGTTTCTGTAGATTCTTGTAATTTGTTTCTGTGTAAGTTGTCTCGCAATTTTGAGGGGATTAAGGTCGCAGTTAAGGTGTTTGAGGAATTTCCTGAATTGGGTGTTTGTTGGAATACTGTTTCTTATAATATTGTTCTTCATTGTCTTTGTCGATTGGGTAAGGTGAAAGAAGCACACAACCTGCTTGTGCAAATGGAGCATAGAGGAGATTTTCCTGATGTTGTGAGTTATGGTGTTGTTGTTAGTGGATATTGTAGAAATGGTGAGCTAGATAAGGTTTTGAAGCTTGTGGGTGAGTTGAAGAGAAAAGGGTTGAAACCTAATGAATACATTTACAATAACATTATTGTGCTTCTTTGTGAGAGTGGAGAAGTAGTTGAAGCGGAGCGAGTGTTGAGGGAGATGAGAAAATGTGGTGTTTTTCCTGATAATGTAGTGTATACGACTCTCATTAGCGGTTTCTGCAAGTCTGGAGATTTTAAGGCCACGTGCAAACTGTTCGATGAAATGAAGCATAAGAAAATAGTTCCCGATTTTGTGATGTATACTTCTGTGATTCACGGGATTTGTAAGAGTGGAAAGATGGTTGAAGCGCGTGAACTGTTTAGTGAAATGTGTATGAAAGGGTTGGAACCAGATGAGGTGACTTATACAGCGCTTATTGACGGGTATTGCAAGGTTGGTGAAATGAAAGGGGCTTTTGCCGTTCACAACCAGATGGTTCAGAAGGGTCTGATTCCAAATGTTGTCACTTATACTGCGTTGGTTGACGGCCTTTGTAAGAATGGAGAGATCGATGTAGCGAATGAGCTTCTTGATGAAATGTCTAGAAAGGGACTTCAACCGAATGTCTGCATGTATAACACGATCGTAAATGGTCTTTGTAAGATAGGAAATATAGCACAAGCAGTTAAAATTATGGAAGAAATGGACCTGGCAGGGTTTTATCCCAACACTATTACATACACTACACTCATTGATGCATATTGTAAGATGGGGGAAATGGCCAAGGCTCATGAGTTGCTGCGCATTATGCTTGATAAAGGACTTCAACCTACAATTGTTACATTCAACGTGCTAATGAATGGGTTTTGCATGTCAGGGATGTTGGAAGAAGGTGAAAGGTTAATCAAATGGATGTTTGAGAACAGTATAATGCCAAATGCCACGACATTCAATTCTCTTATGAAGCAGTACTGCATTAGAAATAACATGCGTGCAACTACCGAGATTTACAAGGTTATGCATGCCCGAGGAGTGATGCCTGACAGTAACACGTACAATATTTTGATTAAAGGGCATTGTAAAGCTAGAAATATGAAAGAGGCGTGGTTTCTGCATAAACAAATGGTTGAAAAAGGATTTAATGTCACCACCACTACATATAATGCTCTTATAAGAGGTTTCTATAAGAGGAAGAAATTTGTGGAAGCTAGGAAGTTGTTTGAGGAGATGAGAACACATGGTTTGGTTGCTGAGAAAGATATATATGACATTTTCATTGATGTGAACTATGAAGAAGGAAACTGGGAAATCACTCTTGAGCTTTGTGATGAAGCAATAGAGAAATGTCTCGTTAATGAAACTTAG | 2205 | 0.3964 | MKRRTTSIIFSNLHRRFHQFPLTTAANFSTTPRPFPDHSPRNPSVTDTDLIRHVTTTIKRRRLEPLRRVLKPYESRFKPSHLIWVLINIKNDYKLVLNFFNWAKSRSEEEQQLHPTLESLCIVVHIAVASNDVETAKRLVFEFWAKPRLDVLKSFELFTERLVYTYKDWGSHPLVFDVYFQVLVETGFVLEAEKLFHKLLGYGVVVSVDSCNLFLCKLSRNFEGIKVAVKVFEEFPELGVCWNTVSYNIVLHCLCRLGKVKEAHNLLVQMEHRGDFPDVVSYGVVVSGYCRNGELDKVLKLVGELKRKGLKPNEYIYNNIIVLLCESGEVVEAERVLREMRKCGVFPDNVVYTTLISGFCKSGDFKATCKLFDEMKHKKIVPDFVMYTSVIHGICKSGKMVEARELFSEMCMKGLEPDEVTYTALIDGYCKVGEMKGAFAVHNQMVQKGLIPNVVTYTALVDGLCKNGEIDVANELLDEMSRKGLQPNVCMYNTIVNGLCKIGNIAQAVKIMEEMDLAGFYPNTITYTTLIDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEEGERLIKWMFENSIMPNATTFNSLMKQYCIRNNMRATTEIYKVMHARGVMPDSNTYNILIKGHCKARNMKEAWFLHKQMVEKGFNVTTTTYNALIRGFYKRKKFVEARKLFEEMRTHGLVAEKDIYDIFIDVNYEEGNWEITLELCDEAIEKCLVNET* | 735 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 383 | 417 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 488 | 522 | IPR002885 | - | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 221 | 327 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | Pfam | PPR repeat | 666 | 695 | IPR002885 | - | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 656 | 728 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 584 | 655 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 521 | 583 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 243 | 277 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 348 | 382 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 278 | 312 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 418 | 452 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 593 | 627 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 523 | 557 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 313 | 347 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 350 | 383 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 280 | 314 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 420 | 454 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 666 | 696 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 455 | 489 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 525 | 558 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 491 | 524 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 385 | 419 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 245 | 274 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 560 | 593 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 631 | 663 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 596 | 628 | IPR002885 | - | |
| Tpr7g2116 | 734 | TIGRFAM | PPR: pentatricopeptide repeat domain | 315 | 348 | IPR002885 | - | |
| Tpr7g2116 | 734 | PANTHER | PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN | 59 | 721 | - | - | |
| Tpr7g2116 | 734 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL | 59 | 721 | - | - | |
| Tpr7g2116 | 734 | SUPERFAMILY | HCP-like | 456 | 692 | - | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat | 380 | 410 | IPR002885 | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat | 483 | 515 | IPR002885 | - | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 328 | 436 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | Gene3D | Tetratricopeptide repeat domain | 437 | 520 | IPR011990 | GO:0005515 | |
| Tpr7g2116 | 734 | Pfam | PPR repeat family | 418 | 466 | IPR002885 | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat family | 592 | 641 | IPR002885 | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat family | 243 | 291 | IPR002885 | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat family | 522 | 570 | IPR002885 | - | |
| Tpr7g2116 | 734 | Pfam | PPR repeat family | 316 | 361 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 453 | 487 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 558 | 592 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 628 | 662 | IPR002885 | - | |
| Tpr7g2116 | 734 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 663 | 697 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr7g2116 | 1 | 733 | Glycosyltransferase | AT1G05670 | 58.390 | 0.0 | 890 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr7g2116 | - | - | cam:101508281 | 1249.19 |