Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2082 ATGTCTCTTCTATCACGTTTCGCTTCATCACAATTCGGATCCAACATCCTCAAACCCACTTCAATCCTCTCATCATCTCAACGACGTCGTTCCTTTTCTTCGTCTTCCGATGAAACCCTAACAATTGAAACCTCCATCCCATTCACCTCCCACAACTGCGAACCACCGTCTCGCACGGTTGAAACCACCGCATCAGAACTCATGTCCTTCTTCCGTGACATGGTTCTCATGCGTCGTATGGAGATCGCCGCTGATTCACTTTACAAAGCCAAATTAATCCGCGGTTTCTGTCATCTCTATGATGGTCAGGAAGCTGTTGCTGTTGGTATGGAATCAGCAATTACTCGAAAAGACTGTGTAATTACTGCTTATAGAGATCATTGTACCTTTCTCTGCCGCGGTGGAACCCTAATTGAGGTTTTTTCTGAACTTATGGGTCGGAGAGATGGTTGTTCCAAAGGGAAAGGTGGTTCCATGCATTTTTATAGGAAGGAAGGAGGGTTTTATGGTGGTCATGGAATTGTTGGTGCTCAGATTCCACTTGGTGTTGGATTGGCTTTTGGTCAGAAATATTCTAAGGATCCAAATGTTACTTTTTCTTTGTATGGTGATGGTGCTGCTAATCAGGGTCAGTTGTTTGAGGCTCTTAATATTGCTGCTCTTTGGGATCTTCCTGCAATTTTAGTTTGCGAGAATAATCATTATGGAATGGGAACTGCTGAGTGGAGATCTGCCAAGAGTCCTGCTTATTACAAACGTGGGGATTATGCTCCTGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAGCAAGCTTGCAAATTTGCAAAGGAACATGCTTTGAAGAATGGTCCCCTTATTCTTGAAATGGACACATACAGATATCATGGCCACTCCATGTCTGATCCTGGCAGCACATACCGTACACGTGATGAAATTAGTGGTGTTAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGGTATTGGCTCATGACATTTCTACTGAAAAGGAACTAAAGGACATTGAGAAAGCAGCGAGAAAAGAAGTTGACGAAGCCATTGCCAAAGCAAAGGAAAGTCAAGTGCCAGACCCATCTGATCTATTTACCAATGTCTATGTTAAAGGTTTAGGAGTTGAGGCATGTGGTGCTGATAGGAAAGAAGTAAAAGCTACTTTGCCATAA 1194 0.433 MSLLSRFASSQFGSNILKPTSILSSSQRRRSFSSSSDETLTIETSIPFTSHNCEPPSRTVETTASELMSFFRDMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMESAITRKDCVITAYRDHCTFLCRGGTLIEVFSELMGRRDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQIPLGVGLAFGQKYSKDPNVTFSLYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRSAKSPAYYKRGDYAPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHDISTEKELKDIEKAARKEVDEAIAKAKESQVPDPSDLFTNVYVKGLGVEACGADRKEVKATLP* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2082 397 CDD TPP_E1_PDC_ADC_BCADC 70 360 - -
Tpr7g2082 397 Pfam Dehydrogenase E1 component 72 368 IPR001017 GO:0016624
Tpr7g2082 397 MobiDBLite consensus disorder prediction 300 320 - -
Tpr7g2082 397 Gene3D - 24 393 - -
Tpr7g2082 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 14 397 - -
Tpr7g2082 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 397 - -
Tpr7g2082 397 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 57 378 IPR029061 -
Tpr7g2082 397 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 65 377 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2082 Tpr-Chr7 26231705 26239727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2082 4 397 Acyl Lipid Metabolism Gene Families AT1G24180 77.468 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2082 K00161 - gmx:100813933 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2082 7 26231705 26239727 Tpr7g2082 7 26231705 26239727 ECH