Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2056 ATGGATTCTCTATCTATGTATGACCTAAGCAAATTCTGTCCTTATAATACAGTGCTGTACGATCACAGTGATCCATCAATTAATACTGTTTTGACAGCACCAACTGATAAACCTGGGGTGGCATTGCTTGATTTTGTCATTTTCCCACCCAGGTGGCTTGTTGCTGAGCATACCTTCCGACCTCCGTATTATCATCGCAATTGCATGAGTGAATTTATGGGTCTCATCCATGGTAACTATGAGTTGTTTTTACAGGCAAAGGATGATGGGTTTCTTCCGGGTGGTGCAAGTCTTCATAACTGTATGACTCCCCATGGTCCTGATACCAAGTCATATGAGGCCACTATTTCTCGTGGGAACAATGTAGGACCTCACAAGATCACCGACACATTGGCTTTTATGTTTGAGTCAAGTTTGATTCCCCGTATCAGCCGATCGGCTCTTGAATCTCCATTCCTGGATCATGATTATTACCAATGTTGGATTGGTCTAAGATCTCATTTCACAGTTCCTGAGAAATCTCTTGGAAGCCTAACCTTGAACAATGGAATAAGGACCAAGGAGTGA 567 0.4268 MDSLSMYDLSKFCPYNTVLYDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYELFLQAKDDGFLPGGASLHNCMTPHGPDTKSYEATISRGNNVGPHKITDTLAFMFESSLIPRISRSALESPFLDHDYYQCWIGLRSHFTVPEKSLGSLTLNNGIRTKE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2056 188 SUPERFAMILY RmlC-like cupins 7 169 IPR011051 -
Tpr7g2056 188 Pfam Homogentisate 1,2-dioxygenase C-terminal 10 168 IPR046451 -
Tpr7g2056 188 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 7 169 IPR005708 GO:0004411|GO:0006559|GO:0006570
Tpr7g2056 188 Gene3D Jelly Rolls 3 139 IPR014710 -
Tpr7g2056 188 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 7 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2056 Tpr-Chr7 25722613 25724451 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2056 K00451 - gmx:100779961 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2056 7 25722613 25724451 Tpr7g2056 7 25722613 25724451 ECH