Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1541 ATGAGTGAGGAGCATATGAGAGAACCATCGGAGAAAACAAAATACTATAAAGATTGTCCTGGTTGTAAGGTAGAACAATCCAAAGAGCTCAATCAAGGGGTATCCATTACAAATCTTTTCATCATATGGATGGTAGTATTATGTTCAACACTACCTGCATCATCACTATTTCCATTCCTTTATTTCATGATTAGGGATTTTAAAATCGCAAAAGCCGAGGCCGATATTAGTTACTATGCCGGTTTTGTAGGATCATCTTTCATGCTTGGAAGAACTTTTACATCTGTATTATGGGGAATGGTTTCCGATCGCTATGGTCGAAAACCTGTTATAATGTTCGGTGTTTTCGCAGTTGTGGTATTCAACACACTATTTGGCTTAAGTTCAAGTTTTTGGATGGCTATTATCACAAGATTTCTTCTGGGATGTTTAAATGGTGCAATTGGACCAGTAAAGGCTTATGCCGCTGAACTTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCTACTGTTAATGCAGCTTGGGGAACAGGTTTAGTCATTGGACCAGCGTTGGGAGGCTATTTGGCTCTTCCAGCAGAGAAACATCCACATCTATTCCCAAAGGGTTCCTTCCTAGACAAGTTTCCTTACTTCTTGCCGTGCTTTGTAATATCAGGTGTTTCATTTGTAGTAGTTATCGCCTGCTTCTGGATTCCGGAAACACTTCACAATCACAATGGTAACCATGCTGAGTCTATAGATGATACTGAAGCTATAGAAAATGGAAACAACGATGTTGATAAAGAAAAGACAGTACAAAAAAATGAAAATCTGTTCATGAATTGGCCATTAATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATATTGCATATCAAGAGGTTTTCTCGCTGTGGTGTGTTAGTCCTAAAAGTCTAAGAGGTTTGAACTTCTCAACTAATGATGTTGGTAATGTTCTTGCAATTTCAGGTCTAGCACTTGTGATCTACCAACTTACCCTATACCAATATATGGCAAAAGCTTGTGGGCCTGTTTGCATTGCCAGAATCACAGGGATATTTTCTATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGCATAGCCTTATACATAGTCATTAGTATTGCTTCCATCTTGAAGAATATGATCATAGTGACGATTACAACAGCCTTATTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGAGGAGCAGCTAATGGAATTTCCCTGACAGCCATGTCTCTATTCAAAACTTTTGGCCCTGCTACTGGTGGTACTATATTAACTTGGTCGCAAAAGCGTCTGGATGCTGCTTTTCTACCGGGCACCCACATGGTTTTTTTCTTCCTGAATTTAATCGAAGGACTAGGTATATTTATGATATTCAAACCATTCCTCGGAGAGAAAAAGAAAACACAGTCAGATCAGTTGCACTGA 1464 0.3928 MSEEHMREPSEKTKYYKDCPGCKVEQSKELNQGVSITNLFIIWMVVLCSTLPASSLFPFLYFMIRDFKIAKAEADISYYAGFVGSSFMLGRTFTSVLWGMVSDRYGRKPVIMFGVFAVVVFNTLFGLSSSFWMAIITRFLLGCLNGAIGPVKAYAAELFREEHQALGLSTVNAAWGTGLVIGPALGGYLALPAEKHPHLFPKGSFLDKFPYFLPCFVISGVSFVVVIACFWIPETLHNHNGNHAESIDDTEAIENGNNDVDKEKTVQKNENLFMNWPLMSSIIAYCVFSLHDIAYQEVFSLWCVSPKSLRGLNFSTNDVGNVLAISGLALVIYQLTLYQYMAKACGPVCIARITGIFSIPLLQSYPFIAMLSGIALYIVISIASILKNMIIVTITTALFLLQNRAVEQHQRGAANGISLTAMSLFKTFGPATGGTILTWSQKRLDAAFLPGTHMVFFFLNLIEGLGIFMIFKPFLGEKKKTQSDQLH* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1541 487 PRINTS Tetracycline resistance protein signature 111 135 IPR001958 GO:0022857
Tpr7g1541 487 PRINTS Tetracycline resistance protein signature 168 190 IPR001958 GO:0022857
Tpr7g1541 487 PRINTS Tetracycline resistance protein signature 343 363 IPR001958 GO:0022857
Tpr7g1541 487 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 485 - -
Tpr7g1541 487 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 485 - -
Tpr7g1541 487 Gene3D MFS general substrate transporter like domains 36 462 IPR036259 -
Tpr7g1541 487 SUPERFAMILY MFS general substrate transporter 38 480 IPR036259 -
Tpr7g1541 487 CDD MFS_SLC46_TetA_like 42 472 - -
Tpr7g1541 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 478 IPR020846 GO:0022857
Tpr7g1541 487 Pfam Major Facilitator Superfamily 42 430 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1541 Tpr-Chr7 17334490 17339481 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1541 - - gmx:100800124 750.74