Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1260 ATGGATCCTTCATCTTCCACATCACTCCCACAATCTCTCCACCTCGCTATGGCCGCGTTACTCGGAGCCTCTTTCATGGCCATTTCCGCTTTCTACATCCACCGCCGCACCGTCGACCATGTCCTCCACCGTATCGTCGAAATCCGTCGCGCACCGCCTGCTGTAACAACCGATGAAGCAAACTCCGATGAGGAAGAGAACTCCGGCGATGATCTGAGCGGGTTCGACGGCGGAGAAACGGAAACGGATAACGATTCGAGAAATTATCAAGGAACGTTGTCGAGGTCTTTAGATGAGAATACGAACTTGCTTCGAAACTATAGAGTTTCTTCTTCCATGCCGGACGTTGTTTCTGCAACTGAATGGTTTCCTGATGGTCGTAAGAACCGTTCGTCTTCGCATGATAATCTTAATTCTGTTCCGTTAGGGCTTCCATCTCTTCGAACGAGTTCAAAGCTTGAGAGTTCTCAGATTTCGAGTTCTTATAAGAGGATAGCTTCTGTTGGTAGAATTAACACTCCGAGATCACCGGGACGAAATACATTTGAAAATGCTGATGATTCTGATGATGATGGAACACAGCTTAGTGAGGATAATCGGATTCCTTTTTACCCTGTGACTAGAGATTCTTCAAATTCTTATGGACTAAATTCAACTGTTCCATTCAGAGTTGATGATGTAAATGCCGCGAATAATCAGATGTTTGGAGAGGTTTCGAAAGAAGCAGGAGCTGGTACAAATATTAACGGTGCAATGACAGATTCAACTTCAGTAAATGCAGCTGGGAATGATCTTGTGTTTGTCAACAATGTCTTGTCGGCAAGAAGCACAATGCTCGAGCCAATGAATATTGAAGAGGAGGAAGTTTGCAAGATGATTCGTGAATGCTTAGATTTGCGTAAGAAATATGTTTACAAGGAAAATGTCGTTCCATGGAAGGCTGAACCTGTCGAAACTAACTCTGATCCATTTCACTTTGAACCAGTTGAAGCAACAGGACACCACTTTCGAATGGAAGATGGAGTCGTACGTGTTTTTGCAAATAAAACTGATACTGAAGAGCTATTCCCTGTTGCAAGCGCAACAAGTTTTTTTACTCATATGGATTACATTCTCAAAGTTATGTCCATTGGGAATGTTCGTTCTGCATGCTACCACAGACTGCGTTTTCTTGAGGAAAAATTCCGCCTTCATCTGTTACTGAATGCAGATCGGGAGTTTGTTGCCCAGAAAAGTGCACCACACCGAGACTTCTACAATATCCGAAAAGTTGATACTCACATTCATCATTCTGCATGCATGAATCAGAAGCATCTCCTCCGCTTCATCAAGTCAAAGTTAAGAAAAGAACCTGATGAGGTTGTTATATTTAGAGATGGAAAGTATATGACGCTTAAGGAGGTGTTTGAGAGTTTGGATTTGACTGGATATGATCTGAATGTGGATTTGTTGGACGTCCATGCAGATAAGAGCACATTTCATAGATTTGACAAATTCAACCTAAAGTATAATCCTTGTGGACAGAGTAGACTCAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTTTCTGGCTGAAGTAACAAAGCAAGTTTTGTTAGATCTTGAAGCAAGTAAATATCAGATGGCCGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGCGAATGGGATCAGCTGGCAAGTTGGTTTGTTAACAATGCTCTTTATAGTAAGAATGCTGTATGGCTAATCCAGTTACCACGGCTATATAATATCTACAGGAGCATGGGAATTGTTACCTCCTTTCAGAATATTCTGGATAATGTGTTTATCCCTCTTTTTGAAGCCACAGTAGATCCAAATTCTCATCCTCAATTACATTTGTTTTTGATGCAGGTGGTTGGATTTGATCTAGTAGATGATGAAAGCAAACCAGAAAGGCGTCCAACTAAGCACATGCCTACTCCAGCTGAGTGGACAAATGAATTCAATCCAGCATATTCTTATTATCTCTATTACTGCTATGCAAACTTATACACACTCAACAAGCTGCGTGAGTCTAAAGGAATGACAACAATTAAGTTGCGACCTCATTGTGGAGAGGCAGGCGATAGTGATCATTTGGCCGCTGCCTTCCTCCTATGCCATAACATTTCTCATGGCATTAATCTACGGAAGACTCCTGTTTTGCAATACTTATATTACCTTGCACAGGTTGGATTAGCTATGTCGCCACTTAGCAATAATTCCCTTTTCTTGGACTATCACCGCAATCCCTTGCCCATGTTTTTCCAGCGAGGGCTGAATGTCTCTCTCTCTACAGATGATCCTTTGCAAATTCATTTGACTAAAGAGCCATTGTTAGAAGAATATAGTGTTGCAGCAAAGGTATGGAAACTCTCCGCTTGTGACCTGTGTGAGATAGCTAGGAATTCTGTTTACCAATCTGGATTTTCACATCAAGCCAAGTTACACTGGCTAGGGGATAAATATTTCTTGAGAGGTTCTGAAGGAAATGACATTCACAAGACAAATGTTCCCAGTTTGAGGATCTCTTTCCGATATGAGACATGGAAGGATGAAATGCAATATATTTACGCTGGTCAAGCTACCTTTCCTGAAGATGTAGATCCATGA 2628 0.4163 MDPSSSTSLPQSLHLAMAALLGASFMAISAFYIHRRTVDHVLHRIVEIRRAPPAVTTDEANSDEEENSGDDLSGFDGGETETDNDSRNYQGTLSRSLDENTNLLRNYRVSSSMPDVVSATEWFPDGRKNRSSSHDNLNSVPLGLPSLRTSSKLESSQISSSYKRIASVGRINTPRSPGRNTFENADDSDDDGTQLSEDNRIPFYPVTRDSSNSYGLNSTVPFRVDDVNAANNQMFGEVSKEAGAGTNINGAMTDSTSVNAAGNDLVFVNNVLSARSTMLEPMNIEEEEVCKMIRECLDLRKKYVYKENVVPWKAEPVETNSDPFHFEPVEATGHHFRMEDGVVRVFANKTDTEELFPVASATSFFTHMDYILKVMSIGNVRSACYHRLRFLEEKFRLHLLLNADREFVAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNIYRSMGIVTSFQNILDNVFIPLFEATVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQVGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHQAKLHWLGDKYFLRGSEGNDIHKTNVPSLRISFRYETWKDEMQYIYAGQATFPEDVDP* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1260 875 ProSitePatterns Adenosine and AMP deaminase signature. 768 774 IPR006650 GO:0009168|GO:0019239
Tpr7g1260 875 PANTHER AMP DEAMINASE 12 874 - -
Tpr7g1260 875 Pfam AMP deaminase 298 862 IPR006329 GO:0003876|GO:0032264
Tpr7g1260 875 Gene3D - 334 858 - -
Tpr7g1260 875 SUPERFAMILY Metallo-dependent hydrolases 266 863 IPR032466 -
Tpr7g1260 875 TIGRFAM AMP_deaminase: AMP deaminase 328 862 IPR006329 GO:0003876|GO:0032264
Tpr7g1260 875 MobiDBLite consensus disorder prediction 59 78 - -
Tpr7g1260 875 MobiDBLite consensus disorder prediction 54 97 - -
Tpr7g1260 875 MobiDBLite consensus disorder prediction 169 196 - -
Tpr7g1260 875 Gene3D - 434 524 - -
Tpr7g1260 875 PANTHER AMP DEAMINASE 12 874 IPR006329 GO:0003876|GO:0032264
Tpr7g1260 875 CDD AMPD 364 859 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1260 Tpr-Chr7 13190660 13199466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1260 K01490 - gmx:100793831 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1260 7 13190660 13199466 Tpr7g1260 7 13190660 13199466 ECH