Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1251 ATGAGCATCTCCACCACTGTTTTTTCTGAGCCACTCTTCAACTTCAAACGTTGTCACTACCACAGATTAGCTACCATTTCTCATTCCAAGCTAAATCAACACACTCTCTCTTCCTCTTTTTTATTCTCCAGTCATAAATATGATTCTTGTTCTTGGATATTGAAGCCACCCCATAAGTTTTTCTCTCCAAAGTTTGAAACTTTTGCTACAGATACAGATACCCTTGAGTCGATTCAGTCTTCTGATGTCATTTTCAATCAGACTCATCCTATCAACAGAATCGAACTGGTGGAGGGAAAGATCTTTGTAAGATTAGATCAGGGAAATGATTTGAAGAATTCAGAGCTTATAGTTGGTTGCAATCTACCAGGAAAATGGATTCTTCATTGGGGAGTTTCCCGTGCGGATGATATTGGAAGTGAATGGGATCAACCTCCCCGTGATATGATACCTGCTGGATCTATTCCTATAAAGGACTATGCTATAGAGACACCTTTGAAGAAATCATCATCATCTGAAGGAGATACTTTTCATGAAGTCAGGATCGGTTTTAAACCAAGCGATGAAATTTCAGCAATTAATTTTGTTCTCAAGGACGAGGAAACTGGTGCTTGGTATCAACACAAAGGAAGAGACTTCAAAGTTCCTCTGGTCAACTATCTTAAGGAGGATGCTAATTTACTTGGACCTAAAACAGGCTTAAGTTCGTCGCAAGGGGACATAGGGCAGATATCTAACGTTATCCTGAAGTCGGAATCAACCGTCGACAAAGTTCAAGAAAACAGCAGTGAATCCGAAAGTCCAAAAAAGGAAAATAGTCAAGTAGAAGGTTTCAATGTAGAACTATCTTTAACCAAGGAAGTTACTGTCAATAACTCTATCAGTGTCTCCGTTAGAAAATGCTCCGAAACAGCTAAATATCTTTTAGATTTAGAAACGGATATACCGGGAGATGTTTTCCTTCATTGGGGAGCTTCTAGAGATGATTTAAGAATTTGGGAAGCTCCACCTGCTCCTCATCCACCACAAACTGTATCGTTTAAAAAGACAGCTTTGAGAACTCAATTAAAGTCAAGAGGCAGTGGAGAGGGAAGTTCAGTACAAGTCTCTCTTGGAGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGATAAATCAAAATACGTGGTTAAATAACAATGGAAATGATTTTTACGTCCCTCTCCCGACTCCCGGTAGCATAATTATTGGCAACATAGAGGATCAATCAAAAGTCGTGAAGAGTGAAGTGACTGAAGAGACAAGCGAAGAGGAATCTAACTCTGCATTTACGAATGAAATAATCAATGAAATAAGGAGTTTGGTTACAGGCATTTCGTCTGTGAAGAGAAGAAAAACAAAATCTAAAGAAGCACAAGAAACCATTCTTCAAGAAATTGAAAGGCTGGCTGCTGAAGCCTACAGTATTTTCAGAACTTCTGTTCCAACTTTCTCAGAGGAAGTTATTGTGGAATCCGAGGTTGCTTTGGAATCTGAATCACCTGAGTTGCCACCAAAAATATGCTCAGGAACTGGCACGGGGTATGAAATAGTATGCCAAGGGTTTAATTGGGAATCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCAGAAGAACTATCGTCTCTTGGCTTCACTGTGATTTGGTTACCGCCACCTACAGATTCTGTTTCACCGGAAGGATACATGCCAAGGGATTTATATAATTTAAATTCCAGATATGGTAACATTGAAGAACTGAAGGATGTGGTGAAAACATTTCATAAATTTGGAATCAAGGTGCTAGGAGATGCTGTTTTGAATCACCGTTGTGCCCAACATCAGAATCAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGAGCAGTTGTAGCCGATGATCCACATTTTCAGGGGCGGGGCAACAAGAGTAGTGGAGATAATTTCCATGCGGCTCCAAACATTGATCACTCACAGGACTTTGTGAGAAAGGATATCAAAGAATGGTTATGCTGGCTAAGGGATGAAATTGGATATGATGGGTGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACGAAACCTTACTTTTCCGTGGGAGAGTACTGGGATTCCCTCAGTTACACGTATGGTGAAATGGATCATAATCAAGATGCACACAGGCAGAGGATCGTTGACTGGATTAGTGCTGCCGGTGGTAGTGCTGGTGCATTTGATGTTACAACCAAAGGAATTCTTCACTCTGCATTGGAAAGATGTGAATATTGGCGCTTGTCAGATCAGCAGGGAAAACCCCCCGGCGTTCTTGGATGGTGGCCGTCTCGTGCTGTTACTTTTATAGAAAACCATGACACTGGTTCTACACAGGGTCACTGGAGATTTCCCCGCGATAAAGAAATGCAAGGATATGCTTACACTCTTACTCACCCAGGAACTCCGTCGGTGTTCTTTGACCACATTTTCTCTCACTATAAAAAGGAAATAGCAGCACTTCTCTCTATTAGGAAACGGAACGGCATCAACTGCAGAAGCAAAGTTAAAATTCACAAGTCAGAAAGGGATGTTTATGCCGCTATCATAGACGAAAAAGTTGCTATGAAAATCGGTCCTGGTCATTTTGAACCACCTAGTGGTTCACAAAACTGGTCAACAGCTTGGGAAGGAAGAGACTATAAGATTTGGGAGGATGCATCATAA 2745 0.4084 MSISTTVFSEPLFNFKRCHYHRLATISHSKLNQHTLSSSFLFSSHKYDSCSWILKPPHKFFSPKFETFATDTDTLESIQSSDVIFNQTHPINRIELVEGKIFVRLDQGNDLKNSELIVGCNLPGKWILHWGVSRADDIGSEWDQPPRDMIPAGSIPIKDYAIETPLKKSSSSEGDTFHEVRIGFKPSDEISAINFVLKDEETGAWYQHKGRDFKVPLVNYLKEDANLLGPKTGLSSSQGDIGQISNVILKSESTVDKVQENSSESESPKKENSQVEGFNVELSLTKEVTVNNSISVSVRKCSETAKYLLDLETDIPGDVFLHWGASRDDLRIWEAPPAPHPPQTVSFKKTALRTQLKSRGSGEGSSVQVSLGEEFSGFLFVLKINQNTWLNNNGNDFYVPLPTPGSIIIGNIEDQSKVVKSEVTEETSEEESNSAFTNEIINEIRSLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIFRTSVPTFSEEVIVESEVALESESPELPPKICSGTGTGYEIVCQGFNWESNKSGRWYMELKEKAEELSSLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGNIEELKDVVKTFHKFGIKVLGDAVLNHRCAQHQNQNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRDEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTYGEMDHNQDAHRQRIVDWISAAGGSAGAFDVTTKGILHSALERCEYWRLSDQQGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPRDKEMQGYAYTLTHPGTPSVFFDHIFSHYKKEIAALLSIRKRNGINCRSKVKIHKSERDVYAAIIDEKVAMKIGPGHFEPPSGSQNWSTAWEGRDYKIWEDAS* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1251 914 Pfam Alpha-amylase C-terminal beta-sheet domain 853 911 IPR012850 GO:0004556|GO:0005509|GO:0005975
Tpr7g1251 914 Gene3D Glycosidases 522 855 - -
Tpr7g1251 914 CDD AmyAc_arch_bac_plant_AmyA 523 862 - -
Tpr7g1251 914 PANTHER ALPHA-AMYLASE 86 911 - -
Tpr7g1251 914 SMART alpha-amyl_c2 852 912 IPR012850 GO:0004556|GO:0005509|GO:0005975
Tpr7g1251 914 Gene3D - 856 912 IPR013780 -
Tpr7g1251 914 SUPERFAMILY (Trans)glycosidases 519 839 IPR017853 -
Tpr7g1251 914 SUPERFAMILY Glycosyl hydrolase domain 856 911 - -
Tpr7g1251 914 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 86 911 - -
Tpr7g1251 914 MobiDBLite consensus disorder prediction 255 275 - -
Tpr7g1251 914 Pfam Alpha amylase, catalytic domain 547 804 IPR006047 GO:0005975
Tpr7g1251 914 SMART aamy 522 851 IPR006047 GO:0005975
Tpr7g1251 914 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1251 Tpr-Chr7 12981560 12990353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1251 31 911 Glycoside Hydrolase AT1G69830 65.380 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1251 K01176 - gmx:100788193 1456.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1251 7 12981560 12990353 Tpr7g1251 7 12981560 12990353 ECH