Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1230 ATGTTGGACGGTCGATCCTGCGTGGTTCCCGGGTTGTTTTCGAGTTCTTGCCAGGCAGACAACAATTGGTCTTTCATGAAATTCATGCCGGATTTGGACATGACAAATGGCAAGCGACATATAGATATTGATGATGAAGACGAACGGATGCCGAGGAAGGTTAACAGGAGATTGGATTCTTGTTATCAAGGTGAGATGGATTCTGTTGTTCCGCAAATCGATCTGGATGATGATCAGAGGAAGGATTTTGAGCCGTTGAACAATTGCCGAATAGTTGAAAAGGCTGTTGCTTTTTCTGTTCAGTTTTCTGCTGAACAATCGCAGCTTTCATTGTTGCAGCTTTCATTGTCGATTTTCGGCGATGAACAACAGAAGGAGCGGCAACTTGATGATGGGAATTTGATGAATTCCAACGACGAGCCGTCGGATGAGCAGAAGGAGCGTTATGCAGGGGATTCATCAGATTCCAGTTCACTTTTGCCGCGCATGAATCGGGACAGTTCAATTACCTGTCTAAGCCGCTGTTCTAGGTCTGATTATGGTTCTCTTGCCTCGCTGAATAGGAGCTTCCGTAACATAATTCGGAGTGGTGAGCTCTATGCATGGAGGAGACTGAATGGTATCATAGAGCACTGGATTTATTTTTCATGTGCCCTCCTCGAATGGGAGGCCTATGATCCGATTCGCAACCGGTGGATGCATTTACCTAGAATGGCTTCTAATGAATGCTTCATGTGTTCCGATAAGGAGTCCTTAGCAGTAGGTACCGAACTTCTTGTGTTTGGGAGGGAGTTGCAATCGCATGTCATATACAGATACAGTCTTTTGACAAACTCATGGGAATCCGGAATGAGGATGAATTTTCCAAGATGCTTGTTTGGATCTGCTAGCCTCGGAGAGATTGCAATTCTAGCTGGCGGTTGTGATTCAGAAGGACATATCCTCGACTCGGCTGAGCTCTATAATTCCGAGAATCAAACATGGGAAACACTCCCAAGTATGAACAAGCCGAGGAAGATGTGCTCAGGGGTGTTCATGGATGGAAAATTTTATGTTATTGGGGGAATCGGTGGGCGCGAATCCAAGCTTCTTACATGCGGTGAGGAGTACAATATACAAACTAGAACATGGAAAGAAATCCCTAACATGTCCCCTGGACGTAGTGCCAGGGGATCAGAGATGCCTGCTACGGCCGAGGCACCGCCTCTAGTTGCCGTTGTAAATAATGAATTATATGCCGCTGATTATGCTGACATGGAGGTTAAAAAGTATAATAAGGATAGCAAATTATGGATCACAATGGGTAGATTACCGGAGCGAGCGGCGTCAATGAACGGATGGGGTCTTGCATTTAGGGCATGTGGAAATAGGCTTATTGTTATTGGTGGACCAAGGAGTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGACCTCCACAATGGAATCTACTTGCAAGAAAACAATCTGGTAACTTTGTTTATAATTGTGCTGTGATGGGATGCTGA 1521 0.4523 MLDGRSCVVPGLFSSSCQADNNWSFMKFMPDLDMTNGKRHIDIDDEDERMPRKVNRRLDSCYQGEMDSVVPQIDLDDDQRKDFEPLNNCRIVEKAVAFSVQFSAEQSQLSLLQLSLSIFGDEQQKERQLDDGNLMNSNDEPSDEQKERYAGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELYAWRRLNGIIEHWIYFSCALLEWEAYDPIRNRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELQSHVIYRYSLLTNSWESGMRMNFPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSENQTWETLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNIQTRTWKEIPNMSPGRSARGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYNKDSKLWITMGRLPERAASMNGWGLAFRACGNRLIVIGGPRSHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1230 506 MobiDBLite consensus disorder prediction 127 162 - -
Tpr7g1230 506 SUPERFAMILY Kelch motif 219 503 IPR015915 GO:0005515
Tpr7g1230 506 Pfam Kelch motif 337 384 IPR006652 GO:0005515
Tpr7g1230 506 Pfam Kelch motif 289 335 IPR006652 GO:0005515
Tpr7g1230 506 Gene3D - 206 496 IPR015915 GO:0005515
Tpr7g1230 506 SMART kelc_smart 301 348 IPR006652 GO:0005515
Tpr7g1230 506 SMART kelc_smart 349 397 IPR006652 GO:0005515
Tpr7g1230 506 SMART kelc_smart 257 300 IPR006652 GO:0005515
Tpr7g1230 506 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Tpr7g1230 506 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 506 - -
Tpr7g1230 506 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1230 Tpr-Chr7 12683361 12686314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1230 166 382 EF-hand Containing Proteins AT4G39560 26.267 4.13e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1230 - - gmx:100791897 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1230 7 12683361 12686314 Tpr7g1230 7 12683361 12686314 ECH