Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1207 ATGGCTGAGAAGTTGCAGGGTTCAGAAGAGAGGTCAAGCTGGAAGTACAATAACCCTACCACTTCCAAACTCGTCGTTTTGGCTGACCTCAACGTCGATCCTCCAGAAGCCGAACCCGATGACGATGATTCTTCACTTCTCCCTCCACCACACATTCAAATTACCAGATTGATAAATGACGAAAACAGTCAAGATAAGAGCTTGTTGTCCAAAGACACCGATAGCATTGAAGGTGAAGGTAAAAAGTTTAACAAACTGGGGAAATGCCGTTCCAAACCTAGCAAGACAGATTCTTCTATTGATTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAACTCCAAGGGGCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGCATGAAGACTGGATTGGTTCATGTTGCGAGGAAGATGCCTAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTATATTGTCTTATGAGAAGGCAGAAGAGATATTACTCAGGCCTGAGGTTGAGATTGATAGAGCAGAGTTTCTTTCTTTAGTTCAGATTCACCATGCACAGTGCCTGATAATAGAAAGTTCATCAGAAAATAATTCAGACAAAGAACTTGAATCTCACGAACTTGAGGAAATTATTTCTAAACTGAAAGAATCAATGCAATCAGATATCAGGCAGGCAGCTGTATGGAATACTCTCGGTTTTATCCTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCTCAGTTTTGTCATCCTTGTTGGCCATTGCACCAGAGAACTATGATTGCCTAGGTAATCTTGGAATAGCTTATCTTCAAATAGGAAATTTGGAATCATCTGCAAAGTGTTTCCAAGAGTTGATCCTAAAAGATCAAAACCACCCTGCAGCATTGGTCAATTATGCTGCCCTTCTTTTGTGTAAATACGCTTCAGTAGTAGCAGGTGCTGGTGCAAATGCTGCTGAAGGTGCTTTGGCTGAACAGTCCAAGGCTGCTAATGTTGCCAAGGAATGTTTGTTAGCTGCCATTAAAGCAGATGGAAAATCAGCCCATATTTGGGCAAATCTTGCCTATGCATTTTCTATCAGTGGGGATCATCGAAGTTCCAGCAGGTGCTTGGAGAAGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGTTATGCTGTTGCTAGCCATAGAGTAAAGGAGGCAGAAAGATGTCAAGATCCTAGTGAACTGCTTTCCTGTGCTGGAAATGAGATGGCTTCCATAATAAGAGATGGTGATTCATCCCTGGTTGAGCTTCCAATAGCATGGTCCGGGCTTGCAATGGTTCACAAGGCTCAGCATGAGATCTCAGCAGCATATGAAAGTGAACAGCATGGGCTGGCAGAAATTGAAGAGCGTGCGGTTTCCAGTCTAAAGCAGGCCATATCAGAAGATCCAGATGATGTTGTGCAGTGGCACCAACTTGGCCTTCACAGTCTCTGTGCTAGGCAATTCAAAACATCACAAAAATACCTCAAAGCTGCTGTTGCCTGTGACAAGCGTTGCAGCTATGCATGGTCCAACCTCGGTGTCTCACTTCAACTATCAGAAGAACAATCACATGCTGAAGAAGTTTACAAGCGGGCTTTGTCTTTGGCAACAACACAAGAAGCACATACTATACTATCCAATATGGGAATTCTCTATCGCCATCAGAAGAAATATCAACTTGCGAAGGCTATGTTTACAAAGTCACTTGAACTACAGCCAGGTTATGCTCCTGCATTCAACAATCTGGGTCTTGTTTTTGTTGCTGAGGGCCTGTTAGAAGAAGCCAAGTATTGTTTTGAGAAAGCACTTGAATCAGATCAATTGCTGGATGCAGCCAAGTCTAACCTGATTAAGGTTGCCACAATGTCGAACATATGTAAAGGCCTTTCCTCATGTAGTCTTAAAGAATGA 1953 0.4291 MAEKLQGSEERSSWKYNNPTTSKLVVLADLNVDPPEAEPDDDDSSLLPPPHIQITRLINDENSQDKSLLSKDTDSIEGEGKKFNKLGKCRSKPSKTDSSIDCGADADGDQHVQLQGAPSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILSYEKAEEILLRPEVEIDRAEFLSLVQIHHAQCLIIESSSENNSDKELESHELEEIISKLKESMQSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLESSAKCFQELILKDQNHPAALVNYAALLLCKYASVVAGAGANAAEGALAEQSKAANVAKECLLAAIKADGKSAHIWANLAYAFSISGDHRSSSRCLEKAAKLEPNCMSTRYAVASHRVKEAERCQDPSELLSCAGNEMASIIRDGDSSLVELPIAWSGLAMVHKAQHEISAAYESEQHGLAEIEERAVSSLKQAISEDPDDVVQWHQLGLHSLCARQFKTSQKYLKAAVACDKRCSYAWSNLGVSLQLSEEQSHAEEVYKRALSLATTQEAHTILSNMGILYRHQKKYQLAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALESDQLLDAAKSNLIKVATMSNICKGLSSCSLKE* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1207 650 Pfam Tetratricopeptide repeat 357 390 IPR019734 GO:0005515
Tpr7g1207 650 Pfam Tetratricopeptide repeat 143 172 IPR019734 GO:0005515
Tpr7g1207 650 ProSiteProfiles TPR repeat profile. 590 623 IPR019734 GO:0005515
Tpr7g1207 650 Coils Coil 206 226 - -
Tpr7g1207 650 Gene3D Tetratricopeptide repeat domain 469 554 IPR011990 GO:0005515
Tpr7g1207 650 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g1207 650 SUPERFAMILY TPR-like 329 463 IPR011990 GO:0005515
Tpr7g1207 650 SMART tpr_5 590 623 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 268 301 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 357 390 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 437 470 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 486 519 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 520 553 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 234 267 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 143 176 IPR019734 GO:0005515
Tpr7g1207 650 SMART tpr_5 556 589 IPR019734 GO:0005515
Tpr7g1207 650 SUPERFAMILY TPR-like 469 620 IPR011990 GO:0005515
Tpr7g1207 650 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 16 647 - -
Tpr7g1207 650 Gene3D Tetratricopeptide repeat domain 555 641 IPR011990 GO:0005515
Tpr7g1207 650 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 16 647 - -
Tpr7g1207 650 Pfam Tetratricopeptide repeat 556 619 - -
Tpr7g1207 650 SUPERFAMILY TPR-like 137 313 IPR011990 GO:0005515
Tpr7g1207 650 ProSiteProfiles TPR repeat profile. 234 267 IPR019734 GO:0005515
Tpr7g1207 650 Gene3D Tetratricopeptide repeat domain 326 468 IPR011990 GO:0005515
Tpr7g1207 650 Gene3D Tetratricopeptide repeat domain 204 325 IPR011990 GO:0005515
Tpr7g1207 650 MobiDBLite consensus disorder prediction 65 95 - -
Tpr7g1207 650 Pfam Tetratricopeptide repeat 244 303 - -
Tpr7g1207 650 Gene3D Tetratricopeptide repeat domain 125 177 IPR011990 GO:0005515
Tpr7g1207 650 ProSiteProfiles TPR repeat profile. 357 390 IPR019734 GO:0005515
Tpr7g1207 650 ProSiteProfiles TPR repeat profile. 556 589 IPR019734 GO:0005515
Tpr7g1207 650 MobiDBLite consensus disorder prediction 30 108 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1207 501 622 Glycosyltransferase AT3G04240 26.829 2.75e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1207 - - gmx:100820184 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1207 7 12320067 12325807 Tpr7g1207 7 12320067 12325807 ECH