Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1206 ATGCAAGTTATGGCCATGGCATCAGCAAATAGCATAATCTCCATTTCCTCTGCTTCATTGTTGAATCGAACTCATCAACCAAAAACAACAACATTAATTAGTCTTCAAAAACACCATGAACAACAAAGTATTCCATCATCATCCTCTTTAAGCGTCACAGCTTTTAAGATATCAGCTCCAACAACCAGAAGATGTAGGTTGAGTTGCTCAGCTTCAGCATCTTCCTTTTCCACTCTTCCTTCAGCTCTTCTTTTTGACTGTGATGGAGTTCTTGTTGACACTGAAAAAGATGGCCACCGTATTTCTTTCAATGACACCTTCCAAGAGAAAGAACTAAGTGTTACCTGGGACGTGGAATTGTATGGTGAATTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACGGCGTACTTTAACAAGACAGGTTGGCCTGCGAATGCCCCGACAGGTGAACAAGAAAGGAAAGATTTCATAGCTTCACTTCACAAGAGAAAGACAGAACTATTCATGGAACTTGTTGAGAAAAAGCTGCTGCCTCTTCGCCCAGGTGTTGCAAAGCTTGTTGATCAGGCTTTAACTCAAGGAGTCAATGTTGCAGTTTGCAGCACTTCCAATGAAAAGGCGGTCTCTGCAATAGTATCATTTTTACTAGGACCTGAGCGGGCAGAAAAAATCAAGATATTTGCAGGAGATGTTGTTCCCCACAAAAAACCTGATCCAGCCATCTATCTACTGGCAGCCAGTACTCTCGGTGTTGAACCTTCGAGATGTGTCGTGGTTGAGGATAGTGCAATAGGCCTTGCAGCTGCTAAAGGGGCCGGGATGAAGTGTATAGTAACAAAGAGCGGGTATACAGCAGATGAAGATTTCTTAAATGCAGATGCTGTATTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTTTGTGGTAGCCTTCTTGAGAAGCAATATGTCAGCTAG 972 0.4259 MQVMAMASANSIISISSASLLNRTHQPKTTTLISLQKHHEQQSIPSSSSLSVTAFKISAPTTRRCRLSCSASASSFSTLPSALLFDCDGVLVDTEKDGHRISFNDTFQEKELSVTWDVELYGELLKIGGGKERMTAYFNKTGWPANAPTGEQERKDFIASLHKRKTELFMELVEKKLLPLRPGVAKLVDQALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPHKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKGAGMKCIVTKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLEKQYVS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1206 323 SFLD phosphoglycolate phosphatase 78 306 - -
Tpr7g1206 323 SUPERFAMILY HAD-like 81 299 IPR036412 -
Tpr7g1206 323 Pfam Haloacid dehalogenase-like hydrolase 83 279 IPR041492 -
Tpr7g1206 323 PANTHER CBBY-LIKE PROTEIN 60 322 - -
Tpr7g1206 323 CDD HAD_CbbY-like 82 282 - -
Tpr7g1206 323 Gene3D Putative phosphatase; domain 2 94 178 IPR023198 -
Tpr7g1206 323 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 163 279 IPR006439 -
Tpr7g1206 323 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 78 306 - -
Tpr7g1206 323 Gene3D - 82 298 IPR023214 -
Tpr7g1206 323 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 60 322 IPR044999 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1206 Tpr-Chr7 12316201 12319522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1206 - - gmx:100816266 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1206 7 12316201 12319522 Tpr7g1206 7 12316201 12319522 ECH