LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1186	ATGGCTCAGTTGAATGCTATTCTCACACACTCATTCCTATCTACTGCTCCTTCAACACATGCAAGAGATCAGCTGGTTGTGCATCACAGGTTCTGCAAGGCAAACCCTTCATCATTTAAAGAGTTTTACAAGAAGAACAAGAACAAGTTGATGTCACCAAGAACATGTTTTGGTGCTGCAAGTAAACATCAAGTTATAAATGCAGTGCTTTATCAAGATGTAGAAAAGTCTGAGACCAAGAAGGTTGATGGACTAAGGGGTAAATTGAATAAGGTTGTTCTGGCTTACAGTGGCGGCTTAGACACATCGGTTGTTGTCCCCTGGCTGAGAGAGAACTATGGCTGTGATGTTGTTTGCTTCACTGCTGATCTAGGACAAGGTGCAAGTGAATTGGAAGGTTTGGAAGAGAAGGCTAAAGCTAGTGGAGCTTCTCAGTTAGTGGTGAAGGATTTGAAGGAGGAATTTGTTAGGGATTATGTATTCCCTTGCCTGCGTGCTGGTGCAGTTTATGAGAGGAAGTATTTGCTTGGAACGGCAATAGCTCGCCCTGTTATTGCAAAGGCTATGGTGGATATCGCCAAAGAAGTTGGAGCTGACGCTGTCTCCCATGGTTGTACAGGGAAAGGAAATGATCAGGTTCGATTTGAGCTATCTTTTTTCGCTCTGAATCCCAAGTTAAATGTTGTGGCTCCATGGAGGGAGTGGGATATTTCGGGGAGGGAGGATGCTATTGAGTATGCTAAGAAGCATAACGTACCTGTTCCTGTTACCAAAAAATCCATATATAGTAGGGACAGGAATCTTTGGCACATAACCCATGAGGGTGATGTTCTGGAAGATCCAGCAAATGAACCTAAAAAGGATATGTACATGTTGACTGCAGACCCTGAGGATGCTCCAAATCAACCAGAATATGTGGAGGTTGGGTTTGAGTCAGGCATTCCGGTGTCCGTGAATGGGAAGAGACTTTCCCCAGGAAATTTGGTTGCTGAGCTGAATGAGATAGGTGGAAGGCATGGAATAGGCCGTGTCGACTTAGTTGAAGACCGCATTGTAGGCTTGAAGAGCCGAGGAGTTTATGAAACTCCAGGTGGCACCATTCTCTTCACTGCAGCAAGAGACTTAGAGACTTTAACACTTGATCGCGAAACACTTCAACTTAAAGACTCGTTAGCACTGAAATATGCAGAGTTAGTGTATGCTGGTAGGTGGTTTGATCCACTTCGTGAGTCGATGGATGCATTCATGGAGAACATCTCAAAGACTACAACAGGATCAGTGTATTTGAAACTGTATAAAGGTAGTGTTTCTGTGAGGGGCCGGAAGAGTCCTTATAGTTTGTATAGGGAAGATATTTCTTCATTTGAGAGTGGTGAGATATATAATCATGCAGATGCTGTTGGGTTTATAAGGCTCTATGGTCTTCCATTGAAGATCAGAGCCATGATGGAACAAGGCATTTAA	1464	0.4365	MAQLNAILTHSFLSTAPSTHARDQLVVHHRFCKANPSSFKEFYKKNKNKLMSPRTCFGAASKHQVINAVLYQDVEKSETKKVDGLRGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTADLGQGASELEGLEEKAKASGASQLVVKDLKEEFVRDYVFPCLRAGAVYERKYLLGTAIARPVIAKAMVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDISGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHITHEGDVLEDPANEPKKDMYMLTADPEDAPNQPEYVEVGFESGIPVSVNGKRLSPGNLVAELNEIGGRHGIGRVDLVEDRIVGLKSRGVYETPGGTILFTAARDLETLTLDRETLQLKDSLALKYAELVYAGRWFDPLRESMDAFMENISKTTTGSVYLKLYKGSVSVRGRKSPYSLYREDISSFESGEIYNHADAVGFIRLYGLPLKIRAMMEQGI*	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1186	487	SUPERFAMILY	Argininosuccinate synthetase, C-terminal domain	259	485	IPR024074	GO:0004055
	Tpr7g1186	487	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	90	254	-	-
	Tpr7g1186	487	CDD	Argininosuccinate_Synthase	92	476	IPR023434	GO:0004055
	Tpr7g1186	487	Pfam	Arginosuccinate synthase	93	479	IPR001518	GO:0004055\|GO:0005524\|GO:0006526
	Tpr7g1186	487	Gene3D	Argininosuccinate synthetase, chain A, domain 2	263	486	IPR024074	GO:0004055
	Tpr7g1186	487	ProSitePatterns	Argininosuccinate synthase signature 2.	204	215	IPR018223	GO:0004055\|GO:0005524\|GO:0006526
	Tpr7g1186	487	Hamap	Argininosuccinate synthase [argG].	89	485	IPR023434	GO:0004055
	Tpr7g1186	487	PANTHER	ARGININOSUCCINATE SYNTHASE	88	485	IPR001518	GO:0004055\|GO:0005524\|GO:0006526
	Tpr7g1186	487	TIGRFAM	argG: argininosuccinate synthase	91	481	IPR001518	GO:0004055\|GO:0005524\|GO:0006526
	Tpr7g1186	487	ProSitePatterns	Argininosuccinate synthase signature 1.	95	103	IPR018223	GO:0004055\|GO:0005524\|GO:0006526
	Tpr7g1186	487	Gene3D	HUPs	86	262	IPR014729	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1186	Tpr-Chr7	11918397	11927151	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1186	K01940		-	gmx:100816038	756.518

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g1186	7	11918397	11927151	Tpr7g1186	7	11918397	11927151	ECH