Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1183 ATGAAGCTTGATACAAGTGGTCTTGAATCGTTCCCTTCACTGATTTTACATGGAAACGATGTCGCCGGAGAAATCTCCGCACCTCCATCATTCGACCTTCCCAATTCCAACGATTTCGATGGGTTCCTTAAAGAAGCTATTCAGATGGTGAAACCCGCTAAGGGTACTACGACTCTTGCTTTTATATTTAAGGAGGGTGTTATGGTAGCTGCAGATTCTCGTGCTAGCATGGGAGGATATATATCATCACAGTCTGTGAAGAAAATTATTGAAATCAATCCTTACATGCTTGGGACAATGGCTGGAGGTGCTGCTGATTGCCAGTTTTGGCATAGGAATCTCGGCATCAAGTGTCGCTTGCATGAGTTGGCAAATAAAAGAAGAATTTCAGTAACAGGAGCCTCCAAGTTACTTGCAAATATTTTATACTCTTACCGTGGAATGGGGTTATCTGTTGGTACCATGATTGCTGGATGGGATGAGACGGGTCCTGGTCTATATTATGTTGATAGTGAAGGAGGAAGACTTAAAGGCACCAGATTCTCTGTAGGATCTGGTTCACCATATGCTTATGGTGTATTGGACAGCGGGTACAAATATGACATGTCAATTGAGGAAGCTTCTGAATTGGCTCGACGAGCAATTTATCATGCCACATTTCGTGATGGTGCTAGTGGTGGAGTTGCTAGCGTTTACTACGTGGGACCAACTGGATGGAAGAAATTGTCCGGTGATGATGTTGGTGAACTTCACTACCATTACAATCCAGTTACCCCAAGCACCACCGTGGAGCAAGAAATGGTTGACGCTGCTGCAGCTTGA 822 0.4428 MKLDTSGLESFPSLILHGNDVAGEISAPPSFDLPNSNDFDGFLKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHYNPVTPSTTVEQEMVDAAAA* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1183 273 Pfam Proteasome subunit 54 234 IPR001353 GO:0005839|GO:0051603
Tpr7g1183 273 ProSiteProfiles Proteasome beta-type subunit profile. 55 234 IPR023333 -
Tpr7g1183 273 PANTHER PROTEASOME SUBUNIT BETA 29 272 - -
Tpr7g1183 273 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 49 254 IPR029055 -
Tpr7g1183 273 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 56 265 IPR029055 -
Tpr7g1183 273 CDD proteasome_beta_type_5 56 243 - -
Tpr7g1183 273 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 29 272 - -
Tpr7g1183 273 PRINTS Proteasome component signature 63 78 IPR000243 GO:0004298|GO:0005839|GO:0051603
Tpr7g1183 273 PRINTS Proteasome component signature 184 195 IPR000243 GO:0004298|GO:0005839|GO:0051603
Tpr7g1183 273 PRINTS Proteasome component signature 195 206 IPR000243 GO:0004298|GO:0005839|GO:0051603
Tpr7g1183 273 PRINTS Proteasome component signature 220 231 IPR000243 GO:0004298|GO:0005839|GO:0051603
Tpr7g1183 273 ProSitePatterns Proteasome beta-type subunits signature. 59 106 IPR016050 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1183 Tpr-Chr7 11881151 11889459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1183 K02737 - gmx:100779240 513.842