Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1177 ATGGCGCCGCACGATCTCCGCCGTCCGTTCAAGCGACCCTTAATCTCCGATCAAGAGAGACGAAGACAACACTCCCTACTCCGTCAAGCACAGAATCGCCTCGACGCCCAACGCCACGCTCGTTTCTTAGTCTCCACCGCATTCTCTCTTTCATCCTCCCAAACCCTCGAATCACATGAGAAGGAAGAACTCGACGTCTTGGAAGCATCGAAGCTAAAAGGCGCTGAAGCTCGAAAATGGTTCGCTAAACAACTCATGCATCCTGAATGGATGATCGATATCCCCCAAAATCTCACCAATGATTGGTTTGTTTTTGCAAGGCCTTCTGGAAAACGGTGTTTTGTTGTTTCCAGTAACGGAACAACTATAAGCCGTTTGAGGAACGGTTCAATACTTCACCGTTTTCCTTCTAAATTGCCAAATGGGGCAAGAACAAAGGAAGTTTCTTCTGGTTCTTCCAATTCTTATTCTATACTCGACTGCATTTTCCACGAGCAGGATCAAACTTACTACGTTATTGATATGGTTTGTTGGCGTGGCTACTCACTCTATGATTGTACGTCAGAGTTTAGGTTCTTTTGGGTGAACTCTAAGCTTGTTGAGACTGGTGCTTGTGATCCTCCTTCATATTATCATAAGTATAGGTTCGGTTTAGTTCCGGTGTATAGTTGTGACCAGAGTGGTTTGTGTTCAGCTTATTCCGTGCCTGTGTCTTATGTCAAAGACGGTCTTCTATTCTATAACAAGCATGCACATTATCAGGCTGGGATTACACCATTAGCATTAGTTTGGAAGGATGAGAACTGCAGCCAATATGTTATGGACACTGACAACAAAGGACAGGTTCCTAACCAACAACAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTGGCTACCTGCGATGATCCTCCTATGGAATTTGGCTGTTTGGATGGAAGCTTCATACAGCAGTCAGATTTGCATTCAGGGTATCTTCTACGGTTTGCAATTGGAGAGGGAGGATTGGTTTTGGTGGATGGGAAACTTGGGAAAGCTGATCTAAAGTATCTTGGCAAAGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATATAGTGTTCGACACTCCCCCCTCATAATTGATGATTTGTTGGGTTCTGTCAGCTCCCCAGCAGATCAAGAAAGTGAAACATGCGACGTTGAGATGGATGGTTGA 1215 0.4486 MAPHDLRRPFKRPLISDQERRRQHSLLRQAQNRLDAQRHARFLVSTAFSLSSSQTLESHEKEELDVLEASKLKGAEARKWFAKQLMHPEWMIDIPQNLTNDWFVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSKLPNGARTKEVSSGSSNSYSILDCIFHEQDQTYYVIDMVCWRGYSLYDCTSEFRFFWVNSKLVETGACDPPSYYHKYRFGLVPVYSCDQSGLCSAYSVPVSYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDNKGQVPNQQQVVLELQEDGKLATCDDPPMEFGCLDGSFIQQSDLHSGYLLRFAIGEGGLVLVDGKLGKADLKYLGKANRARASADSFSKVMFQYSVRHSPLIIDDLLGSVSSPADQESETCDVEMDG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1177 404 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 80 265 - -
Tpr7g1177 404 CDD Snurportin-1_C 80 267 - -
Tpr7g1177 404 Gene3D DNA ligase/mRNA capping enzyme 2 291 - -
Tpr7g1177 404 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 403 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1177 Tpr-Chr7 11778219 11782835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1177 K13151 - gmx:100801927 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1177 7 11778219 11782835 Tpr7g1177 7 11778219 11782835 ECH