Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1173 ATGTCCAGGCCTTTGTACAGAGGTGTGTCTGGGATTCGGATCCCTGATAACAGCATCGATTCGTGGGACTCTCAATCCAAAGATAAAACAGAAAAAGAAGGTTCTGATCCCTTACAATTGAAGTCTCCCTTTAGGTTGCTTTTTGCAGATAATACTTCTCATTCTAAATATGGTGTCACTGAGAATGGTTTTTCGCCCGATCCGTTCATTCTTGGCACTCCTAGAAGTCGGCATAAGTTGATTCTTCTTTTCATGAAGTTTAGTATAGTACTTATAGTTATTCTTGCTCTTGCTGGATCTTTTTGGTGGACAATCTCAATTTCAACTACATCAAGAGGTCAAATTTACCATGGTTATAGAAGACTTCAAGAGAAACTTGTATCGGATCTTGTGGATATCGGCGAGATTTCTTATGCTCCCTCAAAACAGAAAGAATTAGATTTCTGTTCTCAGGAGTTTGAAAACTATGTTCCTTGTTTTAACGTTTCAGACAATCTAGCACAGGGTTACTCTGATGGCAGTGAGTTTGATCGGCAATGTGGCCGTGAACTTAGGCAAGATTGTTTACTTCTCTCGCCAATGACTTACAAAATTCCTCTTCGGTGGCCAACTGGAAGGGATGTTATCTGGGTTTCTAATGTTAAAATCACTGCACAGGAAGTTCTTTCTTCTGGAAGTTTGACCAAGAGGATGATGATGCTTGATGAAGAGCAAATTTCTTTTCGTTCTGCCTCTCTTATGTTTGATGGTGTTGAAGACTACTCACACCAAATTGCAGAAATGATTGGACTCAGAAATGAATCTAACTTCATACAAACAGGGGTTAGAACCATTCTGGACATTGGTTGTGGCTATGGTAGCGTTGGAGCGCACCTCTTTCACAGTCAACTTTTAACTATGTGCATTGCAAACTATGAGTCTTCTGGGAGTCAAGTTCAACTTACACTTGAGAGAGGTCTTCCTGCTATGGTTGCTTCCTTCACCACAAAACAGTTGCCATATCCATCTCTCTCGTATGATATGCTACATTGTGCTAGATGTGGCATAGATTGGGACCAGAAAGATGGAATTCTCTTAATTGAAGCTGATCGACTCTTAAAGCCTGGGGGATACTTTGTCTGGACTTCGCCACTTACAAATGCTCGTAACAAAGACAGTCAGAAAAGGTGGAAGGTCATACATGATTTTACAGAAAACCTTTGCTGGGAGATGCTATCACAGCAAGATGAAACTGTCGTATGGAAGAAAACTAGTAAAAGAAAATGCTATAGTTCAAGAAAGAATGGTTCTCCTCCTCCTCCTTTATGTAGTAGAGGCTATGATGTGGAGTCTCCGTATTATCGAGAACTGCAAAATTGCATAGGAGGAACACATAGCAGCCGTTGGATATCTATTGAAGAGAGGGCAACCTGGCCTTCAAGGGATCACCCGAAAAAGAATGAGCTTGCAATACATGGATTGCAACCTGATGAATTTGCTGAGGACGCCGAAAGCTGGAAGACAGCAGTACGAAATTATTGGTCTCTTCTGTCACCTTTGATATTTTCCGATCATCCAAAGAGACCTGGTGATGAGGATCCTCCACCACCTTACAACATGCTAAGAAACGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTGTTGCAATCTGGAAAGTCTGTGTGGGTCATGAATGTGGTGCCGACGAGTGGACTCAATTATCTTCCCTTGATCCAGGACCGTGGTTATGTTGGCGTTTTGCATGATTGGTGTGAGGCATTTCCAACATATCCTCGAACCTATGACTTGGTACACGCCGCAGGGTTTTTATCCATTGAAGCTGCTCAGCAGCACAGATGTACCATGCTTGATATATTCATTGAAATTGACAGGTTACTTCGTCCAGAGGGTTGGATTATAATTCGAGACACAGTTCCTTTGATAGAGTCAGCTAGAGCTTTAACAACTCGGCTGAAGTGGGATGCAAGAGTTATAGAAATTGAAAGTGATAGCGATCAGAGACTACTGATCTGCCAGAAGCCTTTCTTCAAGAGACAAGCAAATTAA 2058 0.4169 MSRPLYRGVSGIRIPDNSIDSWDSQSKDKTEKEGSDPLQLKSPFRLLFADNTSHSKYGVTENGFSPDPFILGTPRSRHKLILLFMKFSIVLIVILALAGSFWWTISISTTSRGQIYHGYRRLQEKLVSDLVDIGEISYAPSKQKELDFCSQEFENYVPCFNVSDNLAQGYSDGSEFDRQCGRELRQDCLLLSPMTYKIPLRWPTGRDVIWVSNVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQTGVRTILDIGCGYGSVGAHLFHSQLLTMCIANYESSGSQVQLTLERGLPAMVASFTTKQLPYPSLSYDMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWTSPLTNARNKDSQKRWKVIHDFTENLCWEMLSQQDETVVWKKTSKRKCYSSRKNGSPPPPLCSRGYDVESPYYRELQNCIGGTHSSRWISIEERATWPSRDHPKKNELAIHGLQPDEFAEDAESWKTAVRNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHFGGFNSALLQSGKSVWVMNVVPTSGLNYLPLIQDRGYVGVLHDWCEAFPTYPRTYDLVHAAGFLSIEAAQQHRCTMLDIFIEIDRLLRPEGWIIIRDTVPLIESARALTTRLKWDARVIEIESDSDQRLLICQKPFFKRQAN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1173 685 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 155 677 IPR004159 GO:0008168
Tpr7g1173 685 MobiDBLite consensus disorder prediction 22 37 - -
Tpr7g1173 685 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 25 683 IPR004159 GO:0008168
Tpr7g1173 685 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 191 390 IPR029063 -
Tpr7g1173 685 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 25 683 - -
Tpr7g1173 685 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 535 656 IPR029063 -
Tpr7g1173 685 MobiDBLite consensus disorder prediction 17 37 - -
Tpr7g1173 685 Gene3D Vaccinia Virus protein VP39 248 424 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1173 Tpr-Chr7 11710580 11719369 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1173 K23870 - gmx:100812530 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1173 7 11710580 11719369 Tpr7g1173 7 11710580 11719369 ECH