Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1172 ATGGCCTTTTGTTCATCGTGCATCTCTAAAACCCTAAAAAACCATAACCATTACTTCACCGCCAAATTTTCCACCTCTTTTTTAGTCACCAAAACCCCAAAAAAACACAAGAAAAAACACAAATCCAAATCAAGTCCTAGAACAAATCCAATCCAAACCCAACCAAACCGGGTAACCGAATTCGAACGCATCGTAGAACGCGAAACCCTAATGAAATTCGTCACAAGATCCAAAAACTATCTCTCTAACCAACCGGAACACGTTCTTCAACTCGACGACGCCGGTAAACTCCACCGCGAACTCGGTTTCCCACGCGGCCGGAAAATCGCCAAATCAATCCAACGTCATCCGTTACTCTTCCAAACCTACCGTCACTCCGACGGCAAAATGTGGCTCGGATTCACCGATCTAATGGAAGAATTAATCGCGGAAGAACAATCGATTATGGAATCAATGCAACTCGATCGTGTCGATAAGGTTCGTAAGCTTCTCATGATGTCGAGATTTCACCGTATTTCACTAGCTAAAATTCATCACTGTAGAAGTTTATTTGGTATACCGGATGATTTTCGTGACCGTGTTGTGAAATACCCGAATTACTTCCGCGTCGTTGTTGATAGCAACAACAACGACGGGAAGAGCGTTCGGGTTCTTGAGTTGGTTAAATGGGATCCACTTTTGGCTGTGAGTGCGATTGAAAGAGAGTTTATGGTGAATGAAGAAGCTGCTAAGAGGAAATTTAATTTTCCTGTCAAACATGGGAAGGATTTGGATTTGGAATTTGATGATGAAAAGAAGCTGAATTTGTTAAATGCGCTTCCGTTGGTGTCACCTTATTCGGATGGTTCGAAATTAGATGTGTGGACTTTGGAAGCTGAGAAATATAGGGTTGGATTGATTCATGAGTTTTTGAGTTTGACATTGGAGAAGAAAGCTTCAATTCATCACCTTGTTGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCATATGTTACTTAAGCAGCCGAGGGCGTTTTATTTGGCTGGAACTGAGATGAATTGGGTTGTGTTTTTGAAAGATGGTTATGATCGAAATGGTGTTTTGATTCAGAAGGATCCTCAGGTGTTGTTTAATGAAAAGCTTTATAAGTATGCTCAGATACAGGAAATGGAACCTGGTTCTGATGTTGGATTGGAAAATCAACTTATGGATTGA 1203 0.409 MAFCSSCISKTLKNHNHYFTAKFSTSFLVTKTPKKHKKKHKSKSSPRTNPIQTQPNRVTEFERIVERETLMKFVTRSKNYLSNQPEHVLQLDDAGKLHRELGFPRGRKIAKSIQRHPLLFQTYRHSDGKMWLGFTDLMEELIAEEQSIMESMQLDRVDKVRKLLMMSRFHRISLAKIHHCRSLFGIPDDFRDRVVKYPNYFRVVVDSNNNDGKSVRVLELVKWDPLLAVSAIEREFMVNEEAAKRKFNFPVKHGKDLDLEFDDEKKLNLLNALPLVSPYSDGSKLDVWTLEAEKYRVGLIHEFLSLTLEKKASIHHLVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDGYDRNGVLIQKDPQVLFNEKLYKYAQIQEMEPGSDVGLENQLMD* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1172 400 MobiDBLite consensus disorder prediction 31 57 - -
Tpr7g1172 400 Pfam Plant organelle RNA recognition domain 57 383 IPR021099 GO:0003723
Tpr7g1172 400 PANTHER OS09G0473400 PROTEIN 19 391 - -
Tpr7g1172 400 MobiDBLite consensus disorder prediction 31 45 - -
Tpr7g1172 400 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 19 391 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1172 Tpr-Chr7 11705808 11709425 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1172 - - gmx:100813429 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1172 7 11705808 11709425 Tpr7g1172 7 11705808 11709425 ECH