Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1171 ATGGCGATGTGTAGATGTGTCTCTGTTTTGATCGGAAGGAAGGATAAAATCAAGGGCATTGAAGGATCTTCAAAAGGGGACCTCAAAAAGATACATGCCACCAAAGTACAACACCCGACGATATTATCCAAGAGTCGTGATATAAAGCCAGATGCCACCCATGATGTTACAACCTGTGGTACGCAGATGAATTCAAGATCCAATGTGAAAGTTACGAGTCTCGAGAGTCATGCGAAGACTGAAGTAGAGGAAGCTTACGAAGGAGAAGATGAGCATGAAGATTCACCTTCCATCAAGAGAGAGCTCTCTGATTTTGATCTCCAAGTTCATGAAGCTGTTGCAAACAAAGGAGGATATGACCCAACAGGTAAAGAGATGAACTCCCCCAGTTTATATAAAGAAAAAGCCAACATTCAATTGGAAGACAGAGACGAATACCACAAAAAGAGTGTTGATTTAATCCTAAGTGGGCATGTCAGCGATCCTGGGATGGGAAGGTCCAACTTCTGGGCCTCTCCACAGCTCAAGCGATCTTGCTCTAACATGGAAAGAAGGGATATACTTAGGAAGACAGCTCATCACTTTCCAACTTCAAAGTCACAGTCTTTTGAGGATTTGCAGGAATTATCAGCAAATCAGATGGTTAACCTAGAAAGCCCCAGGTCTGTGACGACTCAGCGCAGTGCTGATAGAGTGATGTTGAAAAGGCGTTCGTCTAGTCAAGTTCTCCCTTCTGGAAGTAAAAAATTATGGTGGAAGTTGTTCCTCTGGAGCCACAGGAACATTCATCAACCTTGGGTCAGCAAATCAACACAATTACATCCTGCAAGTGCTGTTTTAAATAGTCAATGTGGGTACTCTTCGGATATCCTGGAACCAAAACAAGGTAATACTTTGAGACACAGGAGATCACCCTCTCCTACATCATCTTCTAGGGAGTTCTTTAGCAAAAGCGGCAAGGATAAAACCATTGATAATCCAAGCTGGAGCAGATTTCAAAAAGAAAAAAACTTCGATTTTCAGACACAGAATCAATGGGTAGCTTTCTCAACAGAATCATCCTCCTTTAACATAGTGGATGAGTGGGTGAAAGATCTTGAAAATCAGCAGCCACCTTCTGAGGAGGATTTTGCTGATGACAATATTGAAAACACTGTCTCTCCACCTCCGGATGCTGATAGATCAATAGCAAGAAGCACAATTCAGTTGACTCGACATCAAGATGGCAACCTTTCAAAGGATATTTTGTACGCGAATAGCGTGGTTCAATCTCTGAATCCAGCCTCAACTGCAGCTCATATATCTGGTATTGGTATAAAAGCCATCCCTGCAATTACACACTTCTCCAGTCTTCGTTCTGTGAATTTGTCGAACAATTTCATCGTTCATATAACACCTGGATTTCTCCCAAAGGGTCTTCATACACTTAATTTGTCAAGAAACAAGATCAGCACCATTGAGGGCCTCCGAGAATTAACCCGGTTGCGGGTACTTGACCTAAGTTATAATCGCATCTCAAGAATTGGACAAGGGCTATCAAATTGTACACCAGTCAAAGAGCTATATCTTGCAGGAAACAAGATAAGTGATGTTGAGGGGCTACACAGGTTGTTGAAGCTAACTGTTCTGGACTTAAGCTTTAACAAGATCACAACAACAAAGGCATTAGGCCAGCTAGTAGCTAATTACAACTCACTTCAGGCCTTGAATCTGATAGGAAATCCAATTCAAAGCAACATCAGTGATGAGCAGCTGCGCAAAGCAGTTTGTGGTCTTCTTCCAAAGGTAGTGTATCTGAACAAGGAATCCATCAAGCCTCAAAGGACACGGGAGATGCTCACTGATAGTGTTGCCAAAGCTGCACTTGGAAACAGCAGCCGGACCCCCACCAGAAGAGCACTGAAGAAAGGTGGCCAAGGAGGATCAAGTTCCTCCAGTGTGCATAGAAACAGCGCTAGTGTAGCCCAGAAAAGCAGGCACAGATCAAAAAGCCAAACTAAACATCGTTAG 2010 0.4308 MAMCRCVSVLIGRKDKIKGIEGSSKGDLKKIHATKVQHPTILSKSRDIKPDATHDVTTCGTQMNSRSNVKVTSLESHAKTEVEEAYEGEDEHEDSPSIKRELSDFDLQVHEAVANKGGYDPTGKEMNSPSLYKEKANIQLEDRDEYHKKSVDLILSGHVSDPGMGRSNFWASPQLKRSCSNMERRDILRKTAHHFPTSKSQSFEDLQELSANQMVNLESPRSVTTQRSADRVMLKRRSSSQVLPSGSKKLWWKLFLWSHRNIHQPWVSKSTQLHPASAVLNSQCGYSSDILEPKQGNTLRHRRSPSPTSSSREFFSKSGKDKTIDNPSWSRFQKEKNFDFQTQNQWVAFSTESSSFNIVDEWVKDLENQQPPSEEDFADDNIENTVSPPPDADRSIARSTIQLTRHQDGNLSKDILYANSVVQSLNPASTAAHISGIGIKAIPAITHFSSLRSVNLSNNFIVHITPGFLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSNCTPVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLIGNPIQSNISDEQLRKAVCGLLPKVVYLNKESIKPQRTREMLTDSVAKAALGNSSRTPTRRALKKGGQGGSSSSSVHRNSASVAQKSRHRSKSQTKHR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1171 669 MobiDBLite consensus disorder prediction 292 322 - -
Tpr7g1171 669 Pfam Leucine Rich repeat 539 551 IPR001611 GO:0005515
Tpr7g1171 669 PANTHER NISCHARIN RELATED 4 667 - -
Tpr7g1171 669 Gene3D Ribonuclease Inhibitor 512 610 IPR032675 -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 61 97 - -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 61 75 - -
Tpr7g1171 669 SMART LRR_typ_2 448 470 IPR003591 -
Tpr7g1171 669 SMART LRR_typ_2 537 559 IPR003591 -
Tpr7g1171 669 SMART LRR_typ_2 492 515 IPR003591 -
Tpr7g1171 669 ProSiteProfiles Leucine-rich repeat profile. 472 493 IPR001611 GO:0005515
Tpr7g1171 669 ProSiteProfiles Leucine-rich repeat profile. 539 560 IPR001611 GO:0005515
Tpr7g1171 669 MobiDBLite consensus disorder prediction 369 395 - -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 292 314 - -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 619 669 - -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 654 669 - -
Tpr7g1171 669 SMART LRR_sd22_2 537 558 - -
Tpr7g1171 669 SMART LRR_sd22_2 515 536 - -
Tpr7g1171 669 SMART LRR_sd22_2 492 514 - -
Tpr7g1171 669 SMART LRR_sd22_2 470 491 - -
Tpr7g1171 669 Pfam Leucine rich repeat 450 505 IPR001611 GO:0005515
Tpr7g1171 669 ProSiteProfiles Leucine-rich repeat profile. 494 516 IPR001611 GO:0005515
Tpr7g1171 669 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 667 - -
Tpr7g1171 669 SUPERFAMILY Outer arm dynein light chain 1 440 600 - -
Tpr7g1171 669 MobiDBLite consensus disorder prediction 619 653 - -
Tpr7g1171 669 Gene3D Ribonuclease Inhibitor 386 511 IPR032675 -
Tpr7g1171 669 ProSiteProfiles Leucine-rich repeat profile. 517 538 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1171 Tpr-Chr7 11702915 11706536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1171 472 581 Receptor kinase-like Gene Family AT4G39400 35.043 1.68e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1171 - - cam:101493323 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1171 7 11702915 11706536 Tpr7g1171 7 11702915 11706536 ECH