Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1170 ATGGCGGCCACTTCTGAATCTTCCACCAGCAACGACGCTTCTCTTCCGGTTGTTGATCTCCGTCTTGTTTCTCAACCCGAACTATTCACTCTCTCTTTTTCGCACGATACCGGTCGTAACCGTCGCATCGACGACGATGCCGTTATCCCTAGAATTGACCGTTCAGTTTTCAATGAGTCCGCCGGTAGCCGTAAACAGACGTTTTCTCGTCTCAATTTTCGTAACAACAACAACCCGAACTCTTCCGTTCCCGTTCCTGTTCCCGTTGCTCCCGCTGTTCCCGCTCCTGAATCTTCGTCTTCGCACATTGCCGTTGACGAAGAGAATTCTCAAATAATCGATCTTCTTCAACGGCTTTTCGGCGTTGAAGCTCTTCGCGGCGCCAATGATGACCGTTTGGTTCCGTTTCAGGGTGAATTCAAACAACCTGCTATTGAATTTACGCCTCAAGGTATTCAGAGCGTTGTAATTGGCGGTGTGGATGGTAGTCAGAGGAAGCGGAAGCGCGGACGGCCACGCAGGGACGAGAGTCCGGTAACGGATATGCAGGTAAAGGAGACGAGTTTAGTTGTTGTCGGCGAGGGTGATATGGAGATGGTGGAAGCGGTTAATGAGCAGAAGGTTGAAGCGGTTAACAAGAAGAAAGGTTTTGTTCTGGAAGATGTTGGGGATCCGTTTGTGGAGCAGTTGATAGCGAGGACACAAGGGATGAATACGGAAGCGCAATTGTCAGAGTTTTTGGAGGGTTTGAATGGTGTTTGGGCGAGTGATAGGAAGAAGCGAAGGATTGTTGATGCTAATATTATCTGTGATTTGCTGCCAACTGGGTGGAAGCTTATTCTTATTCTGCAGAGGAGAGGGGCTCGTGCTTCGGTGGTTTGTCGCCGTTACGTAAGCCCTGATGGACGCCAGTTTGAGTCATACAAGGAGGTTTCTTCATACTTGGATGGTAGTCAGCCGTTCAATAATATCAATATGTCATCTGAAAATAATGTTGGTCACGTTCCTACTGGTGGCATTAAGATTGATGACAATGCAAGTTCTCTTCATGAGAAGCAGGCCACCATATCATCATCCTTTGGAGCCGGAAAGCTAAATACTTCTGATGGGTATTTAAATGGTGACCGGGCTATAGATTTTGAATTAGGTGATACTACTAGTGGATCCTTTGGAGTCTCTGACCATCCAGCTGACGATAAGCTACCACTGAAGGCTGATAAGAATGATGCGAATTCAGATCAGGGATGTTCCCTTTCAGAGGACAGAGTTTATAATCAGAGTGCTGGTCACTTCCCTACAGGTGGCATGAAGATTGATGGCAATGCAAGTTCTCATAAGAAGAAGCAGGTCACCATGTCATCATCAATTCGAACTGAAAAGCTGAACAGTTCTCACCGGAGACCGGATCGGAAATTGGTTCTTGGTCTTAAAGCTATTGATGTTGCATGCAATCCATATCCTTTGGATTTCACAGCTCCTATCTCCAATAGTAGCTGCAGTATTAATCGTTTTTCTGATGAAAGAAATGATGTGAGACGCATAAAAGGCGGAGTTAGTATTTTTGATGGTCAGGATAAAATTACTGGATGCTATGAAACTGTTCCCTATGAAAGTGAGCCAGTACATGTTGGTGGTAATGGGCTTGGGTTTTCCACCACATTAGTAGAAAAACACATTCAGAAAATAGGTTCTGAAAATAGTATGCTGGTTCCAAATTCTGAAGGGAAAAATGACGGAAAGCTAGTTGAGGATGTCAGTCAACAAATTATTTCTAGTAGATATCTGTCAGAAATTAAAGACATTTCTACTAATGGTGAACTTCAGTTTGGTTCTGAAGGCTCTCTTGTCCCATCCCAGAATGAACTTGATCACACATCTATGGACAATGTGAACACGGCACAAACTTCTGTGCTGAAGGACTCTGCTGAGGGAAATTTTTTCTATAATGATATGCCTACCTCATCCATTGATGAGAGAACATGGGATCCCAATGGATACATTAATGATATTTCTTTTAGTGCTTGGCCGCAAGATGCATCTGAGTCTGGTGGAGTTGATTTTACACCCAATCTTTATGTAGCTGACAATGTTGGTCATAATCATGTTCCTCCAATGGATGAAGTTGTGAGTTTACAGAAAAGTTCTATAAATGACCAAATTTTCACAATGGAAAATCTGTTGCACGAAAGTTCTGAAAGTAACTTATTTACTGTAACCGGGAATCAGCACCCTTCTGCTTTTCATGATAATATGAATAACAACTCAGATGGAACCTTTGGTGCACTCAAACATGCTGATGATGGTTGCATGAAGCCTCAGTCAGGAATTGTTTCTTGCAGCGATGTTGTTGCAATAGATCAATATGCATCTCCAAGAGCCATGCAGGGAAGACCGCAATCCGTTTCTGATGAAAGTATGTTAAACCAATTTGACAAGCAAAATGATGATGGTGTTAATATAGGAAATAAATCTTGCTTATCAGAAATGGCGAAGTGTGAAGTTGAAATGTTCCAAACCGACTCGATGGGTATGCCTAAATTTCGGTAA 2547 0.4327 MAATSESSTSNDASLPVVDLRLVSQPELFTLSFSHDTGRNRRIDDDAVIPRIDRSVFNESAGSRKQTFSRLNFRNNNNPNSSVPVPVPVAPAVPAPESSSSHIAVDEENSQIIDLLQRLFGVEALRGANDDRLVPFQGEFKQPAIEFTPQGIQSVVIGGVDGSQRKRKRGRPRRDESPVTDMQVKETSLVVVGEGDMEMVEAVNEQKVEAVNKKKGFVLEDVGDPFVEQLIARTQGMNTEAQLSEFLEGLNGVWASDRKKRRIVDANIICDLLPTGWKLILILQRRGARASVVCRRYVSPDGRQFESYKEVSSYLDGSQPFNNINMSSENNVGHVPTGGIKIDDNASSLHEKQATISSSFGAGKLNTSDGYLNGDRAIDFELGDTTSGSFGVSDHPADDKLPLKADKNDANSDQGCSLSEDRVYNQSAGHFPTGGMKIDGNASSHKKKQVTMSSSIRTEKLNSSHRRPDRKLVLGLKAIDVACNPYPLDFTAPISNSSCSINRFSDERNDVRRIKGGVSIFDGQDKITGCYETVPYESEPVHVGGNGLGFSTTLVEKHIQKIGSENSMLVPNSEGKNDGKLVEDVSQQIISSRYLSEIKDISTNGELQFGSEGSLVPSQNELDHTSMDNVNTAQTSVLKDSAEGNFFYNDMPTSSIDERTWDPNGYINDISFSAWPQDASESGGVDFTPNLYVADNVGHNHVPPMDEVVSLQKSSINDQIFTMENLLHESSESNLFTVTGNQHPSAFHDNMNNNSDGTFGALKHADDGCMKPQSGIVSCSDVVAIDQYASPRAMQGRPQSVSDESMLNQFDKQNDDGVNIGNKSCLSEMAKCEVEMFQTDSMGMPKFR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1170 848 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 576 829 IPR037472 -
Tpr7g1170 848 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 9 358 IPR037472 -
Tpr7g1170 848 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 263 331 IPR001739 GO:0003677
Tpr7g1170 848 MobiDBLite consensus disorder prediction 391 416 - -
Tpr7g1170 848 MobiDBLite consensus disorder prediction 159 181 - -
Tpr7g1170 848 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 576 829 - -
Tpr7g1170 848 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 9 358 - -
Tpr7g1170 848 SUPERFAMILY DNA-binding domain 265 319 IPR016177 GO:0003677
Tpr7g1170 848 Gene3D - 265 332 - -
Tpr7g1170 848 Pfam Methyl-CpG binding domain 269 320 IPR001739 GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1170 - - mtr:MTR_3g074640 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1170 7 11688232 11695122 Tpr7g1170 7 11688232 11695122 ECH