Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1165 ATGACAATACTTGAACCCAACAACATTTGCAATACTGAGAACTATACATTTCCTATTTTCTTCAACCCTAGTTTCGATTTTGGAACTGGAGGATTATTTCTAGAACCTTCAATTCCCGATTCCTTTATTCGTTTCATTTCGTTGAGAATTTCAGCAACTGCTTCTTCTGAATCGAATCTTCACCGCCGGCAACGGCGAAGGCTTCCATGTTTTTTGTCGGTTAGTTTGCCTAGCAATACTAACCTTCCTGTAGATCCCAAACCATACGTACTGCAAGATGGTGACCACGTTTCTGAGAAGGAGACGCCACTGGACGGTGTCGTTTTGCATAAAAAGGTTAGGGCAAGAGAACGCGGTGCTGTCAATACCACCAAGCATCTATGGGCTGGTGCTATATCTGCAATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAATATATAGTTCGTGGTGAGAAGAGGAATATCTTCGAGCTTATTAAATCCATTGCTACTTCTCAAGGGTTGAGAGGTTTTTGGAAGGGGAACCTTCTTAATGTTCTGCGAACAGCTCCGTTCAAAGCTGTTAATTTTAGTGCATACGATACTTATAGAAAGCAACTACTTAGATTCTCTGGGAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGTCACTGCTACTATTATTTGCCTGCCACTCGACACTATTAGGACCAAGATTGTGGCACATGGCGGAGAAGCTTTCGGGGGTGTAATTGGTGCTTTTCAATACATGATTCAAACTGAAGGCTTCTTTTCTTTATACAAGGGTTTAGTGCCATCACTATTAAGCATGGCTCCGTCTAGTGCAGTCTTTTATGGTGTATACGATATGCTAAAATCAGCTTATCTGCATTCACCTGAAGGAATGCAAAGAATCCAGAATATGCATAAACAGGGGCAGGATCATGAACTGAGTGCTTTTGATCAGCTTGAGTTGGGGCCAGTAAGAACGTTGTTGTATGGGGCTGTTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCGACTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCGACTTTTGTCAAAATAGTGGAACAAGGAGGCATTTCAGCCCTTTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAAGTAGAGAAGTAG 1263 0.4196 MTILEPNNICNTENYTFPIFFNPSFDFGTGGLFLEPSIPDSFIRFISLRISATASSESNLHRRQRRRLPCFLSVSLPSNTNLPVDPKPYVLQDGDHVSEKETPLDGVVLHKKVRARERGAVNTTKHLWAGAISAMVSRTCVAPLERLKLEYIVRGEKRNIFELIKSIATSQGLRGFWKGNLLNVLRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAHGGEAFGGVIGAFQYMIQTEGFFSLYKGLVPSLLSMAPSSAVFYGVYDMLKSAYLHSPEGMQRIQNMHKQGQDHELSAFDQLELGPVRTLLYGAVAGACAEAATYPFEVVRRRLQLQVQSTKLSSLATFVKIVEQGGISALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVEK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1165 420 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 24 419 - -
Tpr7g1165 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 299 IPR018108 -
Tpr7g1165 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 204 IPR018108 -
Tpr7g1165 420 Pfam Mitochondrial carrier protein 121 206 IPR018108 -
Tpr7g1165 420 Pfam Mitochondrial carrier protein 330 417 IPR018108 -
Tpr7g1165 420 Pfam Mitochondrial carrier protein 214 301 IPR018108 -
Tpr7g1165 420 Gene3D Mitochondrial carrier domain 117 419 IPR023395 -
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 126 139 IPR002067 GO:0055085
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 139 153 IPR002067 GO:0055085
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 179 199 IPR002067 GO:0055085
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 272 290 IPR002067 GO:0055085
Tpr7g1165 420 PRINTS Mitochondrial carrier protein signature 339 361 IPR002067 GO:0055085
Tpr7g1165 420 PANTHER SOLUTE CARRIER FAMILY 25 24 419 - -
Tpr7g1165 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 330 415 IPR018108 -
Tpr7g1165 420 SUPERFAMILY Mitochondrial carrier 120 412 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1165 Tpr-Chr7 11587572 11603960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1165 199 413 Organic Solute Cotransporters AT5G64970 19.535 1.01e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1165 - - gmx:100812227 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1165 7 11587572 11603960 Tpr7g1165 7 11587572 11603960 ECH