Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1161 ATGGCTGGTGGGATTCTCCCTGTGGATAGTACACCAATTTCTGCCATCAATATTGATGGCAAGTTAACACTCTCAATCATTATTACCTGCATAGTTGCAGCATCCGGTGGCCTTCTTTATGGATATGATCTCGGAGTTTCAGGTGGTGTTACAACTATGGTTCCATTTCTTGAAAAATTCTTTCCGGATATTCTACGAAAGGCAGCTAACACTCAAGTGAATATGTATTGTGTGTATGATAGTCAAGTGTTGACATTATTCACATCTTCTCTTTATCTTGCGGGATTAGTGTCTTCCCTTGCAGCTAGCAAAGTCACGGCGGCATATGGTCGGAGAAACGTCATTATAATAGGCGGTATTCTTTTCCTAGCTGGCGGTGCCATTAATGGTGGTGCCGAAAATATTCCCATGCTCATTCTGGGGCGGGTTCTTCTTGGGTTTGGGGTTGGATTCACTAATCAAGCAGCACCATTGTACCTTTCTGAAACTGCTCCCCCAAAATGGCGAGGTAGTTTTAGCACAGGTTTTCAATTCTTCTTGGGTATTGGCGTAGTCGCGGCGGGTTGCATAAACTTCGCCACATCAAAGCACACATGGGGATGGAGAGTCTCTCTCGGACTTGCAGTAGTGCCAGCACTTGTAATGACAATTGGTTCCTTCCTCATAACCGACACACCAAATAGCTTGGTGGAACGTGGTAAGATAGAGCAAGCCAGAAAAGCTCTACACAAAATTAGAGGATCCTCCATTGATATTGAACCCGAGTTAGAAGAACTTATTAAGTTTACACAAGTTGCAAAATCAGTGAAACAAGAACCCTTTAAGACCATATTAAAAAGGGAGTATCGGCCACATTTGGTGATGGCATTCGCAATCCCATTTTTTCAACAGCTCACAGGGATCAACATCGTCGCTTTTTATTCACCCAACCTCTTTCAATCTATTGGTTTGGGCCACGATGGCGCTTTAATTTCTTCCATTATACTTGGATCCGTTAGCCTTACTTCCAACCTTATCTCTGCCGGTATAGTTGATCGATTTGGTCGAAGAATTTTATTTATAACTGGGGGTGCTGTGATGCTTGTCAACTTGATTGCTGTAGCAATTGTTCTAGCAGTGGTCAGTGGTGTTGATGGTTCAAAAGACATATCAAAGGGCAATGCAATATTGGTATTGGTGCTATTGTGTCTCTACACTGCTGGTTTTGGTTGGTCATGGGGCCCTTTAACATGGCTAATTCCAAGTGAAATTTTCCCAGCAAATATAAGAACCACCGGACAAAGCATAGCTATTGCAGTTCAATTCATAATAATATTTGTGCTATCACAAACATTTTTGACAATGTTATGTCACTTTAAGTTTGGAGCATTTGTGTTCTATGCTTTTTGGGTTACAGTGATGACCTTGTTTATAATCTTCTTCTTGCCGGAGACCAAAGGAATTCCTTTAGAGTCTATGTACACTATATGGGGTAAACATTGGTTTTGGTGTCGGTTTGTTAAAGGAGAAGATGGTCAACAAAATCATCCATGA 1533 0.4168 MAGGILPVDSTPISAINIDGKLTLSIIITCIVAASGGLLYGYDLGVSGGVTTMVPFLEKFFPDILRKAANTQVNMYCVYDSQVLTLFTSSLYLAGLVSSLAASKVTAAYGRRNVIIIGGILFLAGGAINGGAENIPMLILGRVLLGFGVGFTNQAAPLYLSETAPPKWRGSFSTGFQFFLGIGVVAAGCINFATSKHTWGWRVSLGLAVVPALVMTIGSFLITDTPNSLVERGKIEQARKALHKIRGSSIDIEPELEELIKFTQVAKSVKQEPFKTILKREYRPHLVMAFAIPFFQQLTGINIVAFYSPNLFQSIGLGHDGALISSIILGSVSLTSNLISAGIVDRFGRRILFITGGAVMLVNLIAVAIVLAVVSGVDGSKDISKGNAILVLVLLCLYTAGFGWSWGPLTWLIPSEIFPANIRTTGQSIAIAVQFIIIFVLSQTFLTMLCHFKFGAFVFYAFWVTVMTLFIIFFLPETKGIPLESMYTIWGKHWFWCRFVKGEDGQQNHP* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1161 510 CDD MFS_STP 32 477 IPR044778 GO:0015145|GO:0015749
Tpr7g1161 510 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr7g1161 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 479 IPR020846 GO:0022857
Tpr7g1161 510 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 504 IPR045262 GO:0015144
Tpr7g1161 510 Gene3D MFS general substrate transporter like domains 14 493 IPR036259 -
Tpr7g1161 510 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr7g1161 510 SUPERFAMILY MFS general substrate transporter 31 485 IPR036259 -
Tpr7g1161 510 Pfam Sugar (and other) transporter 30 490 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr7g1161 510 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g1161 510 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 3 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1161 Tpr-Chr7 11521933 11526495 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1161 53 501 Organic Solute Cotransporters AT1G34580 60.619 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1161 K24193 - gmx:100799418 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1161 7 11521933 11526495 Tpr7g1161 7 11521933 11526495 ECH